Evidence map›Paper›PMID 34489494›Full record

ArticleScientific reports2021

Gelatin methacrylate hydrogels culture model for glioblastoma cells enriches for mesenchymal-like state and models interactions with immune cells.

Nameeta Shah, Pavan M Hallur, Raksha A Ganesh, Pranali Sonpatki, Divya Naik, Komal Prasad Chandrachari, Ralph B Puchalski, Aditya Chaubey

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Understanding Glioblastoma Dynamics Using 3D Organoids and Engineered Extracellular Matrix.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  7. Hydrogel Microdroplet Based Glioblastoma Drug Screening Platform.Journal of biomedical materials research. Part A · 2026
    Article
  8. Review
  9. Article
  10. Article
  11. Hydrogel microdroplet based glioblastoma drug screening platform.bioRxiv : the preprint server for biology · 2025
    Article
  12. Article
  13. Functional 3D Human Neuron-Glioblastoma Model Reveals Cellular Interactions Enabling Drug Safety Assessments.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Review
  19. Biomaterial-basedCancer pathogenesis and therapy · 2023
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Nameeta ShahMazumdar Shaw Center for Translational Research, Mazumdar Shaw Medical Foundation, Narayana Hrudayalaya Health City, Bangalore, India. nameeta.shah@gmail.com.ORCID http://orcid.org/0000-0002-4429-8414
Pavan M Hallur *Mazumdar Shaw Center for Translational Research, Mazumdar Shaw Medical Foundation, Narayana Hrudayalaya Health City, Bangalore, India.ORCID http://orcid.org/0000-0002-9341-9649
Raksha A Ganesh *Mazumdar Shaw Center for Translational Research, Mazumdar Shaw Medical Foundation, Narayana Hrudayalaya Health City, Bangalore, India.ORCID http://orcid.org/0000-0002-8218-9585
Pranali SonpatkiMazumdar Shaw Center for Translational Research, Mazumdar Shaw Medical Foundation, Narayana Hrudayalaya Health City, Bangalore, India.ORCID http://orcid.org/0000-0002-3458-4281
Divya NaikMazumdar Shaw Center for Translational Research, Mazumdar Shaw Medical Foundation, Narayana Hrudayalaya Health City, Bangalore, India.ORCID http://orcid.org/0000-0001-8055-326X
Komal Prasad ChandrachariMazumdar Shaw Medical Center, Narayana Hrudayalaya Health City, Bangalore, India.ORCID http://orcid.org/0000-0001-9197-2777
Ralph B PuchalskiThe Ben and Catherine Ivy Center for Advanced Brain Tumor Treatment, Swedish Neuroscience Institute, Seattle, WA, 98122, USA.ORCID http://orcid.org/0000-0002-9267-0575
Aditya ChaubeyMazumdar Shaw Center for Translational Research, Mazumdar Shaw Medical Foundation, Narayana Hrudayalaya Health City, Bangalore, India. aditya.chaubey@gmail.com.ORCID http://orcid.org/0000-0002-4645-0985

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glioblastoma is the most lethal primary malignant brain tumor in adults. Simplified two-dimensional (2D) cell culture and neurospheres in vitro models fail to recapitulate the complexity of the tumor microenvironment, limiting its ability to predict therapeutic response. Three-dimensional (3D) scaffold-based models have emerged as a promising alternative for addressing these concerns. One such 3D system is gelatin methacrylate (GelMA) hydrogels, and we aimed to understand the suitability of using this system to mimic treatment-resistant glioblastoma cells that reside in specific niches. We characterized the phenotype of patient-derived glioma cells cultured in GelMA hydrogels (3D-GMH) for their tumorigenic properties using invasion and chemoresponse assays. In addition, we used integrated single-cell and spatial transcriptome analysis to compare cells cultured in 3D-GMH to neoplastic cells in vivo. Finally, we assessed tumor-immune cell interactions with a macrophage infiltration assay and a cytokine array. We show that the 3D-GMH system enriches treatment-resistant mesenchymal cells that are not represented in neurosphere cultures. Cells cultured in 3D-GMH resemble a mesenchymal-like cellular phenotype found in perivascular and hypoxic regions and recruit macrophages by secreting cytokines, a hallmark of the mesenchymal phenotype. Our 3D-GMH model effectively mimics the phenotype of glioma cells that are found in the perivascular and hypoxic niches of the glioblastoma core in situ, in contrast to the neurosphere cultures that enrich cells of the infiltrative edge of the tumor. This contrast highlights the need for due diligence in selecting an appropriate model when designing a study's objectives.

Indexed as

HydrogelsBrain NeoplasmsCell Culture TechniquesCell Line, TumorGelatinGene Expression ProfilingGlioblastomaHumansMethacrylatesTumor MicroenvironmentGelatinHydrogelsMethacrylates

Identifiers

PMID34489494
PMCPMC8421368

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.