Evidence map›Paper›PMID 34487375›Full record

ArticleThe EMBO journal2021

Single-cell transcriptomics of suprachiasmatic nuclei reveal a Prokineticin-driven circadian network.

Emma L Morris, Andrew P Patton, Johanna E Chesham, Alastair Crisp, Antony Adamson, Michael H Hastings

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 81 citations in OpenAlex.

  1. Review
  2. Review
  3. Cell-type-specific circadian and light-responsive transcriptional dynamics in adultProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Review
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  8. Review
  9. A direct SCN-to-DMH output pathway organizes circadian behavioral timing.bioRxiv : the preprint server for biology · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. The inferred functional connectome underlying circadian synchronization in the mouse suprachiasmatic nucleus.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Emma L MorrisDivision of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, UK.ORCID 0000-0003-2251-6967
Andrew P PattonDivision of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, UK.ORCID 0000-0003-2666-4254
Johanna E CheshamDivision of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, UK.ORCID 0000-0002-8981-2667
Alastair CrispDivision of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, UK.
Antony AdamsonThe Genome Editing Unit, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, UK.ORCID 0000-0002-5408-0013
Michael H HastingsDivision of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, UK.ORCID 0000-0001-8576-6651
MRC Laboratory of Molecular Biology · GBUniversity of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/R016658/1Medical Research Council MC_U105170643
6 · The paper itself

Abstract

Circadian rhythms in mammals are governed by the hypothalamic suprachiasmatic nucleus (SCN), in which 20,000 clock cells are connected together into a powerful time-keeping network. In the absence of network-level cellular interactions, the SCN fails as a clock. The topology and specific roles of its distinct cell populations (nodes) that direct network functions are, however, not understood. To characterise its component cells and network structure, we conducted single-cell sequencing of SCN organotypic slices and identified eleven distinct neuronal sub-populations across circadian day and night. We defined neuropeptidergic signalling axes between these nodes, and built neuropeptide-specific network topologies. This revealed their temporal plasticity, being up-regulated in circadian day. Through intersectional genetics and real-time imaging, we interrogated the contribution of the Prok2-ProkR2 neuropeptidergic axis to network-wide time-keeping. We showed that Prok2-ProkR2 signalling acts as a key regulator of SCN period and rhythmicity and contributes to defining the network-level properties that underpin robust circadian co-ordination. These results highlight the diverse and distinct contributions of neuropeptide-modulated communication of temporal information across the SCN.

Indexed as

TranscriptomeAnimalsCircadian ClocksCircadian RhythmGastrin-Releasing PeptideGastrointestinal HormonesGene Expression RegulationGene Regulatory NetworksMiceNeuronsNeuropeptidesReceptors, BombesinReceptors, G-Protein-CoupledReceptors, PeptideReceptors, VasopressinSignal TransductionAVPR1a receptor, mouseGastrin-Releasing PeptideGastrointestinal HormonesGrp protein, mouseNeuropeptidesProk2 protein, mouseProkr2 protein, mouseReceptors, BombesinReceptors, G-Protein-CoupledReceptors, PeptideReceptors, VasopressinVasoactive Intestinal PeptideVasopressinsneural networkneuropeptidesProkineticin2Prokineticin receptor 2single-cell transcriptomics

Identifiers

PMID34487375
PMCPMC8521297
OpenAlexW3197299457

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.