ArticleCladistics : the international journal of the Willi Hennig Society2022
A re-analysis of the data in Sharkey et al.'s (2021) minimalist revision reveals that BINs do not deserve names, but BOLD Systems needs a stronger commitment to open science.
Article in Cladistics : the international journal of the Willi Hennig Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.
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Who cites it
52 citing papers in PubMed.
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- UITOTO: a software for generating molecular diagnoses for species descriptions.Cladistics : the international journal of the Willi Hennig Society · 2026Article
- Characterizing a species-rich and understudied tropical insect fauna using DNA barcoding.GigaScience · 2026Article
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- Gaps and Data Ambiguities in DNA Reference Libraries: A Limiting Factor for Molecular-Based Biodiversity Assessments Using Annelids as a Case Study.Ecology and evolution · 2025Article
- Untangling host specialization in a "double dark taxa" system.Annals of the Entomological Society of America · 2025Article
- "Dark taxonomy": A new protocol for overcoming the taxonomic impediments for dark taxa and broadening the taxon base for biodiversity assessment.Cladistics : the international journal of the Willi Hennig Society · 2025Article
- Delimiting Species-Prospects and Challenges for DNA Barcoding.Molecular ecology · 2025Article
- Identification of BOLD engine deficiencies and suggestions for improvement based on a curated Tachina (Diptera) record set.PloS one · 2025Article
- DNA barcoding, integrative taxonomy, citizen science, and Bush Blitz surveys combine to reveal 34 new species ofZooKeys · 2025Article
- New Records and New Species of Dacnusini (Hymenoptera: Braconidae, Alysiinae) Based on Morphological and Molecular Evidence.Insects · 2024Article
- Towards holistic insect monitoring: species discovery, description, identification and traits for all insects.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024Review
- DNA Barcodes in Taxonomic Descriptions.Methods in molecular biology (Clifton, N.J.) · 2024Article
- Integrative species delimitation and five new species of lynx spiders (Araneae, Oxyopidae) in Taiwan.PloS one · 2024Article
- Towards a Canary Islands barcode database for soil biodiversity: revealing cryptic and unrecorded mite species diversity within insular soils.Biodiversity data journal · 2024Article
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- Characterising the north-western European species ofBiodiversity data journal · 2024Article
- Species Diagnosis and DNA Taxonomy.Methods in molecular biology (Clifton, N.J.) · 2024Article
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Abstract
Halting biodiversity decline is one of the most critical challenges for humanity, but monitoring biodiversity is hampered by taxonomic impediments. One impediment is the large number of undescribed species (here called "dark taxon impediment") whereas another is caused by the large number of superficial species descriptions, that can only be resolved by consulting type specimens ("superficial description impediment"). Recently, Sharkey et al. (2021) proposed to address the dark taxon impediment for Costa Rican braconid wasps by describing 403 species based on COI barcode clusters ("BINs") computed by BOLD Systems. More than 99% of the BINs (387 of 390) were converted into species by assigning binominal names (e.g. BIN "BOLD:ACM9419" becomes Bracon federicomatarritai) and adding a minimal diagnosis (consisting only of a consensus barcode for most species). We here show that many of Sharkey et al.'s species are unstable when the underlying data are analyzed using different species delimitation algorithms. Add the insufficiently informative diagnoses, and many of these species will become the next "superficial description impediment" for braconid taxonomy because they will have to be tested and redescribed after obtaining sufficient evidence for confidently delimiting species. We furthermore show that Sharkey et al.'s approach of using consensus barcodes as diagnoses is not functional because it cannot be applied consistently. Lastly, we reiterate that COI alone is not suitable for delimiting and describing species, and voice concerns over Sharkey et al.'s uncritical use of BINs because they are calculated by a proprietary algorithm (RESL) that uses a mixture of public and private data. We urge authors, reviewers and editors to maintain high standards in taxonomy by only publishing new species that are rigorously delimited with open-access tools and supported by publicly available evidence.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.