Evidence map›Paper›PMID 34487362›Full record

ArticleCladistics : the international journal of the Willi Hennig Society2022

A re-analysis of the data in Sharkey et al.'s (2021) minimalist revision reveals that BINs do not deserve names, but BOLD Systems needs a stronger commitment to open science.

Rudolf Meier, Bonnie B Blaimer, Eliana Buenaventura, Emily Hartop, Thomas von Rintelen, Amrita Srivathsan, Darren Yeo

Abstract readLetterComment
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In one paragraph

Article in Cladistics : the international journal of the Willi Hennig Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Article
  2. Article
  3. UITOTO: a software for generating molecular diagnoses for species descriptions.Cladistics : the international journal of the Willi Hennig Society · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Untangling host specialization in a "double dark taxa" system.Annals of the Entomological Society of America · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Towards holistic insect monitoring: species discovery, description, identification and traits for all insects.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  15. DNA Barcodes in Taxonomic Descriptions.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Species Diagnosis and DNA Taxonomy.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Rudolf MeierDepartment of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore.ORCID 0000-0002-4452-2885
Bonnie B BlaimerMuseum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Center for Integrative Biodiversity Discovery, Invalidenstraße 43, Berlin, 10115, Germany.ORCID 0000-0002-8961-9998
Eliana BuenaventuraMuseum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Center for Integrative Biodiversity Discovery, Invalidenstraße 43, Berlin, 10115, Germany.ORCID 0000-0002-5265-815X
Emily HartopMuseum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Center for Integrative Biodiversity Discovery, Invalidenstraße 43, Berlin, 10115, Germany.ORCID 0000-0002-8598-9844
Thomas von RintelenMuseum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Center for Integrative Biodiversity Discovery, Invalidenstraße 43, Berlin, 10115, Germany.ORCID 0000-0002-6253-3078
Amrita SrivathsanDepartment of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore.ORCID 0000-0002-7988-3437
Darren YeoDepartment of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore.ORCID 0000-0003-1888-7482

Funding

Ministry of Education R-154-000-A22-112
6 · The paper itself

Abstract

Halting biodiversity decline is one of the most critical challenges for humanity, but monitoring biodiversity is hampered by taxonomic impediments. One impediment is the large number of undescribed species (here called "dark taxon impediment") whereas another is caused by the large number of superficial species descriptions, that can only be resolved by consulting type specimens ("superficial description impediment"). Recently, Sharkey et al. (2021) proposed to address the dark taxon impediment for Costa Rican braconid wasps by describing 403 species based on COI barcode clusters ("BINs") computed by BOLD Systems. More than 99% of the BINs (387 of 390) were converted into species by assigning binominal names (e.g. BIN "BOLD:ACM9419" becomes Bracon federicomatarritai) and adding a minimal diagnosis (consisting only of a consensus barcode for most species). We here show that many of Sharkey et al.'s species are unstable when the underlying data are analyzed using different species delimitation algorithms. Add the insufficiently informative diagnoses, and many of these species will become the next "superficial description impediment" for braconid taxonomy because they will have to be tested and redescribed after obtaining sufficient evidence for confidently delimiting species. We furthermore show that Sharkey et al.'s approach of using consensus barcodes as diagnoses is not functional because it cannot be applied consistently. Lastly, we reiterate that COI alone is not suitable for delimiting and describing species, and voice concerns over Sharkey et al.'s uncritical use of BINs because they are calculated by a proprietary algorithm (RESL) that uses a mixture of public and private data. We urge authors, reviewers and editors to maintain high standards in taxonomy by only publishing new species that are rigorously delimited with open-access tools and supported by publicly available evidence.

Identifiers

PMID34487362

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.