Evidence map›Paper›PMID 34485475›Full record

ArticleSouthern African journal of infectious diseases2020

Investigation of two suspected diarrhoeal-illness outbreaks in Northern Cape and KwaZulu-Natal provinces, South Africa, April-July 2013: The role of rotavirus.

Andronica M Shonhiwa, Genevie Ntshoe, Noreen Crisp, Ayo J Olowolagba, Vusi Mbuthu, Maureen B Taylor, Juno Thomas, Nicole A Page

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Southern African journal of infectious diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Andronica M ShonhiwaDivision of Public Health Surveillance and Response, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, Johannesburg, South Africa.ORCID https://orcid.org/0000-0003-2461-5344
Genevie NtshoeDivision of Public Health Surveillance and Response, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, Johannesburg, South Africa.ORCID https://orcid.org/0000-0003-0857-348X
Noreen CrispCommunicable Disease Control, Department of Health, Kimberley, South Africa.ORCID https://orcid.org/0000-0002-2428-8235
Ayo J OlowolagbaCommunicable Disease Control, eThekwini Metropolitan Municipality Department of Health, Durban, South Africa.ORCID https://orcid.org/0000-0003-1282-6486
Vusi MbuthuCommunicable Disease Control, eThekwini Metropolitan Municipality Department of Health, Durban, South Africa.ORCID https://orcid.org/0000-0002-8669-2831
Maureen B TaylorSchool of Health Systems and Public Health, Faculty of Health Science, University of Pretoria, Pretoria, South Africa.ORCID https://orcid.org/0000-0002-2780-5795
Juno ThomasCentre for Enteric Diseases, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, Johannesburg, South Africa.ORCID https://orcid.org/0000-0002-8986-1135
Nicole A PageDepartment of Medical Virology, Faculty of Health Sciences, University of Pretoria, Pretoria, South Africa.ORCID https://orcid.org/0000-0001-5845-4417
National Health Laboratory Service · ZAeThekwini Municipality · ZAUniversity of Pretoria · ZAGovernment of Western Australia Department of Health · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSuspected diarrhoeal-illness outbreaks affecting mostly children < 5 years were investigated between May and July 2013 in Northern Cape province (NCP) and KwaZulu-Natal (KZN) province. This study describes the epidemiological, environmental and clinical characteristics and diarrhoeal-illnesses causative agent(s).

methodsA descriptive cross-sectional study was conducted. Cases were patients presenting at healthcare facilities with diarrhoeal-illness between 09 April and 09 July 2013 in NCP and 01 May and 31 July 2013 in KZN. Laboratory investigations were performed on stools and water samples using microscopy, culture and sensitivity screening and molecular assays.

resultsA total of 953 cases including six deaths (case fatality rate [CFR]: 0.6%) were recorded in the Northern Cape province outbreak. Children < 5 years accounted for 58% of cases. Enteric viruses were detected in 51% of stools, with rotavirus detected in 43%. The predominant rotavirus strains were G3P[8] (45%) and G9P[8] (42%). Other enteric viruses were detected, with rotavirus co-infections (63%). No enteric pathogens detected in water specimens.

conclusionAlthough source(s) of the outbreaks were not identified, the diarrhoeal-illnesses were community-acquired. It is difficult to attribute the outbreaks to one causative agent(s) because of rotavirus co-infections with other enteric pathogens. While rotavirus was predominant, the outbreaks coincided with the annual rotavirus season.

Indexed as

diarrhoeal illnessoutbreakrotavirusrotavirus vaccineSouth Africa

Identifiers

PMID34485475
PMCPMC8378150
OpenAlexW3044179523

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.