Evidence map›Paper›PMID 34483965›Full record

ArticleFrontiers in physiology2021

A Multiple Step Active Stiffness Integration Scheme to Couple a Stochastic Cross-Bridge Model and Continuum Mechanics for Uses in Both Basic Research and Clinical Applications of Heart Simulation.

Kazunori Yoneda, Jun-Ichi Okada, Masahiro Watanabe, Seiryo Sugiura, Toshiaki Hisada, Takumi Washio

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Article in Frontiers in physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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4citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Kazunori YonedaSection Solutions Division, Healthcare Solutions Development Unit, Fujitsu Japan Ltd., Tokyo, Japan.
Jun-Ichi OkadaUT-Heart Inc., Kashiwa, Japan.
Masahiro WatanabeSection Solutions Division, Healthcare Solutions Development Unit, Fujitsu Japan Ltd., Tokyo, Japan.
Seiryo SugiuraUT-Heart Inc., Kashiwa, Japan.
Toshiaki HisadaUT-Heart Inc., Kashiwa, Japan.
Takumi WashioUT-Heart Inc., Kashiwa, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In a multiscale simulation of a beating heart, the very large difference in the time scales between rapid stochastic conformational changes of contractile proteins and deterministic macroscopic outcomes, such as the ventricular pressure and volume, have hampered the implementation of an efficient coupling algorithm for the two scales. Furthermore, the consideration of dynamic changes of muscle stiffness caused by the cross-bridge activity of motor proteins have not been well established in continuum mechanics. To overcome these issues, we propose a multiple time step scheme called the multiple step active stiffness integration scheme (MusAsi) for the coupling of Monte Carlo (MC) multiple steps and an implicit finite element (FE) time integration step. The method focuses on the active tension stiffness matrix, where the active tension derivatives concerning the current displacements in the FE model are correctly integrated into the total stiffness matrix to avoid instability. A sensitivity analysis of the number of samples used in the MC model and the combination of time step sizes confirmed the accuracy and robustness of MusAsi, and we concluded that the combination of a 1.25 ms FE time step and 0.005 ms MC multiple steps using a few hundred motor proteins in each finite element was appropriate in the tradeoff between accuracy and computational time. Furthermore, for a biventricular FE model consisting of 45,000 tetrahedral elements, one heartbeat could be computed within 1.5 h using 320 cores of a conventional parallel computer system. These results support the practicality of MusAsi for uses in both the basic research of the relationship between molecular mechanisms and cardiac outputs, and clinical applications of perioperative prediction.

Indexed as

active stiffnesscross-bridge cycleexcitation contraction couplingfinite element methodheart simulationMonte Carlo methodmultiple time step method

Identifiers

PMID34483965
PMCPMC8414591

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