ArticleJournal of mathematical biology2021
Distinguishing level-1 phylogenetic networks on the basis of data generated by Markov processes.
Article in Journal of mathematical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed.
- Phylogenetic Network Models as Graphical Models.Bulletin of mathematical biology · 2026Article
- Algebraic Invariants for Inferring 4-Leaf Semi-Directed Phylogenetic Networks.Systematic biology · 2026Article
- Characterizing semi-directed phylogenetic networks and their multi-rootable variants.Theory in biosciences = Theorie in den Biowissenschaften · 2025Article
- Distinguishing Phylogenetic Level-2 Networks with Quartets and Inter-Taxon Quartet Distances.Bulletin of mathematical biology · 2025Article
- Beyond Level-1: Identifiability of a Class of Galled Tree-Child Networks.Bulletin of mathematical biology · 2025Article
- When are Quarnets Sufficient to Reconstruct Semi-directed Phylogenetic Networks?Bulletin of mathematical biology · 2025Article
- Group-based phylogenetic models on 3-sunlet networks.Bulletin of mathematical biology · 2025Article
- Squirrel: Reconstructing Semi-directed Phylogenetic Level-1 Networks from Four-Leaved Networks or Sequence Alignments.Molecular biology and evolution · 2025Article
- Leveraging graphical model techniques to study evolution on phylogenetic networks.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025Review
- Dimensions of Level-1 Group-Based Phylogenetic Networks.Bulletin of mathematical biology · 2024Article
- Ultrafast learning of four-node hybridization cycles in phylogenetic networks using algebraic invariants.Bioinformatics advances · 2024Article
- Bioinformatics study of phytase from Aspergillus niger for use as feed additive in livestock feed.Journal, genetic engineering & biotechnology · 2023Article
- Exploring spaces of semi-directed level-1 networks.Journal of mathematical biology · 2023Article
- Classes of explicit phylogenetic networks and their biological and mathematical significance.Journal of mathematical biology · 2022Review
- Identifiability of species network topologies from genomic sequences using the logDet distance.Journal of mathematical biology · 2022Article
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6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Phylogenetic networks can represent evolutionary events that cannot be described by phylogenetic trees. These networks are able to incorporate reticulate evolutionary events such as hybridization, introgression, and lateral gene transfer. Recently, network-based Markov models of DNA sequence evolution have been introduced along with model-based methods for reconstructing phylogenetic networks. For these methods to be consistent, the network parameter needs to be identifiable from data generated under the model. Here, we show that the semi-directed network parameter of a triangle-free, level-1 network model with any fixed number of reticulation vertices is generically identifiable under the Jukes-Cantor, Kimura 2-parameter, or Kimura 3-parameter constraints.
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