Evidence map›Paper›PMID 34480871›Full record

ArticleActa tropica2021

Integration of phlebotomine ecological niche modelling, and mapping of cutaneous leishmaniasis surveillance data, to identify areas at risk of under-estimation.

Clara B Ocampo, Lina Guzmán-Rodríguez, Mabel Moreno, María Del Mar Castro, Carlos Valderrama-Ardila, Neal Alexander

Abstract read
In one paragraph

Article in Acta tropica, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Clara B OcampoCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM. Cali, Colombia; Universidad Icesi., Cali, Colombia; Ministerio de Ciencia Tecnología e Innovación (Minciencias), Bogotá, Colombia.
Lina Guzmán-RodríguezCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM. Cali, Colombia.
Mabel MorenoCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM. Cali, Colombia.
María Del Mar CastroCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM. Cali, Colombia; Universidad Icesi., Cali, Colombia.
Carlos Valderrama-ArdilaUniversidad del Rosario. Bogotá, Colombia.
Neal AlexanderCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM. Cali, Colombia; Universidad Icesi., Cali, Colombia. Electronic address: nalexander@cideim.org.co.

Funding

Vector/Host-Parasite Interface of Leishmaniasis in ColombiaD43TW006589 · FIC · YALE UNIVERSITY · PI GORE SARAVIA, NANCY, TSCHUDI, CHRISTIAN · 2003 to 2024
$4.3M
The Innate Immune Response As A Therapeutic Target For Cutaneous LeishmaniasisU19AI129910 · NIAID · CENTRO INTERNACIONAL (CIDEIM) · PI GORE SARAVIA, NANCY · 2017 to 2021
$2.8M
FIC NIH HHS D43 TW006589NIAID NIH HHS U19 AI129910
6 · The paper itself

Abstract

introductionPassive surveillance systems are thought to under-estimate the true incidence of American cutaneous leishmaniasis (ACL) by two- to five-fold. Ecological niche models based on remotely sensed data can identify environmental factors which favor phlebotomine vectors. Here we report an integrated approach to identifying areas at risk of cutaneous leishmaniasis by applying spatial analysis methods to niche model results, and local surveillance data, in two locations in Colombia with differing vector ecology. The objective was to identify townships in which later phases of the project could implement community-based surveillance to obtain direct estimates of under-reporting. MATERIALS AND

methodsThe study was carried out in one municipality in each of two departments of the Andean region of Colombia: Pueblo Rico in Risaralda, and Rovira in Tolima. Niche mapping by maximum entropy, based on published and unpublished existing locations of Pintomyia (Pifanomyia) longiflocosa and Psychodopygus panamensis, and using variables on land cover, climate and elevation. Field catches were done in each municipality to test predictions of high relative probability of presence. The niche model results were included as a predictor in a conditional autoregressive spatial model, in which the outcome variable was the number of cases by township, as detected by passive surveillance.

resultsHaving rarefied 173 geolocated records, 46 of Pi. longiflocosa and 57 of Ps. panamensis were used for the niche modelling. At the national level, both species had high relative probability of presence on parts of the slopes of the three Andean cordilleras. Pi. longiflocosa also has a high relative probability of presence in the higher parts of the Magdalena valley, as does Ps. panamensis in some areas close to the Caribbean coast. At the local level, field catches confirmed that Pi. longiflocosa was the most abundant species in Rovira, and likewise Ps. panamensis in Pueblo Rico. The spatial regression showed that the incidence of ACL, according to surveillance, was positively, but not statistically significantly, associated with the relative probability of presence from the risk model.

conclusionsThese niche maps bring together published and unpublished results on phlebotomine species which are important vectors in Colombia. Maps of the fitted values of incidence were used to guide the selection of townships in which further phases of the study will attempt to quantify the extent of under-estimation of ACL incidence.

Indexed as

Leishmaniasis, CutaneousPsychodidaeAnimalsColombiaEcosystemInsect VectorsCutaneous leishmaniasisNiche modellingPhlebotominesSurveillanceUnder-estimation

Identifiers

PMID34480871
PMCPMC9017289

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.