Evidence map›Paper›PMID 34480094›Full record

ArticleBritish journal of cancer2022

NTRK1 Fusions identified by non-invasive plasma next-generation sequencing (NGS) across 9 cancer types.

Christian Rolfo, Alexander Drilon, David Hong, Caroline McCoach, Afshin Dowlati, Jessica J Lin, Alessandro Russo, Alison M Schram, Stephen V Liu, Jorge J Nieva and 15 more

Open access · greenAbstract read
In one paragraph

Article in British journal of cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 34 citations in OpenAlex.

  1. Serial Cell-Free DNA Sequencing inJCO precision oncology · 2024
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  11. Network approach in liquidomics landscape.Journal of experimental & clinical cancer research : CR · 2023
    Review
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  13. Review
  14. Article
  15. A review of NTRK fusions in cancer.Annals of medicine and surgery (2012) · 2022
    Review
  16. Review
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 16 institutions in 1 country.

Christian RolfoCenter for Thoracic Oncology, Tisch Cancer Institute, Mount Sinai System & Icahn School of Medicine, Mount Sinai, New York, NY, USA. christian.rolfo@mssm.edu.ORCID http://orcid.org/0000-0002-5109-0267
Alexander DrilonMemorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID http://orcid.org/0000-0001-6806-9061
David HongDepartment of Investigational Cancer Therapeutics, Division of Cancer Medicine, University of Texas M.D. Anderson Cancer Center, Houston, TX, USA.
Caroline McCoachUniversity of California, San Francisco, CA, USA.
Afshin DowlatiUniversity Hospitals Cleveland Medical Center, Cleveland, OH, USA.
Jessica J LinMassachusetts General Hospital Cancer Center, Harvard Medical School, Boston, MA, USA.
Alessandro RussoThoracic Oncology & Experimental Therapeutics Program, Greenebaum Comprehensive Cancer Center, University of Maryland School of Medicine, Baltimore, MD, USA.
Alison M SchramMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Stephen V LiuLombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA.
Jorge J NievaKeck School of Medicine of USC, Section Head - Solid Tumors, USC/Norris Cancer Center, Los Angeles, CA, USA.
Timmy NguyenUniversity Hospitals Cleveland Medical Center, Cleveland, OH, USA.
Shahrooz EshaghianJames R. Berenson, MD, Inc., West Hollywood, CA, USA.
Michael MorseDuke Cancer Institute, Division of Medical Oncology, Durham, NC, USA.
Scott GettingerYale Comprehensive Cancer Center, New Haven, CT, USA.
Mohammad MobayedProMedica Bay Park Hospital Cancer, Sylvania, OH, USA.
Sarah GoldbergYale Comprehensive Cancer Center, New Haven, CT, USA.
Emilio Araujo-MinoKymera Cancer Center and University of New Mexico, Roswell, NM, USA.
Neelima VidulaMassachusetts General Hospital Cancer Center, Harvard Medical School, Boston, MA, USA.
Aditya BardiaMassachusetts General Hospital Cancer Center, Harvard Medical School, Boston, MA, USA.
Janakiraman SubramanianSaint Lukes Cancer Institute/University of Missouri, Kansas City, MO, USA.
Deepa SashitalUS Oncology Network, Texas Oncology, Baytown, TX, USA.
Thomas StinchcombeDuke Cancer Institute, Division of Medical Oncology, Durham, NC, USA.
Lesli KiedrowskiGuardant Health, Redwood City, CA, USA.
Kristin PriceGuardant Health, Redwood City, CA, USA.
David R GandaraUC Davis Comprehensive Cancer Center, Sacramento, CA, USA.
Harvard University · USDuke Medical Center · USGuardant (United States) · USMemorial Sloan Kettering Cancer Center · USUniversity Hospitals of Cleveland · USYale Cancer Center · USGeorgetown University · USMount Sinai Health System · USSaint Luke's Hospital · USTexas Oncology · USThe University of Texas MD Anderson Cancer Center · USUC Davis Comprehensive Cancer CenterUniversity of California, San Francisco · USUniversity of Maryland, Baltimore · USUniversity of New Mexico · USUSC Norris Comprehensive Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Elisa de Stanchina · 1985 to 2026
$347.4M
Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
NCATS NIH HHS UL1 TR001863NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

backgroundActivating fusions of the NTRK1, NTRK2 and NTRK3 genes are drivers of carcinogenesis and proliferation across a broad range of tumour types in both adult and paediatric patients. Recently, the FDA granted tumour-agnostic approvals of TRK inhibitors, larotrectinib and entrectinib, based on significant and durable responses in multiple primary tumour types. Unfortunately, testing rates in clinical practice remain quite low. Adding plasma next-generation sequencing of circulating tumour DNA (ctDNA) to tissue-based testing increases the detection rate of oncogenic drivers and demonstrates high concordance with tissue genotyping. However, the clinical potential of ctDNA analysis to identify NTRK fusion-positive tumours has been largely unexplored.

methodsWe retrospectively reviewed a ctDNA database in advanced stage solid tumours for NTRK1 fusions.

resultsNTRK1 fusion events, with nine unique fusion partners, were identified in 37 patients. Of the cases for which clinical data were available, 44% had tissue testing for NTRK1 fusions; the NTRK1 fusion detected by ctDNA was confirmed in tissue in 88% of cases. Here, we report for the first time that minimally-invasive plasma NGS can detect NTRK fusions with a high positive predictive value.

conclusionPlasma ctDNA represents a rapid, non-invasive screening method for this rare genomic target that may improve identification of patients who can benefit from TRK-targeted therapy and potentially identify subsequent on- and off-target resistance mechanisms.

Indexed as

Oncogene Proteins, FusionBenzamidesBiomarkers, TumorCirculating Tumor DNAHigh-Throughput Nucleotide SequencingHumansIndazolesNeoplasmsNeoplasm StagingProtein Kinase InhibitorsPyrazolesPyrimidinesReceptor, trkABenzamidesBiomarkers, TumorCirculating Tumor DNAentrectinibIndazoleslarotrectinibNTRK1 protein, humanOncogene Proteins, FusionProtein Kinase InhibitorsPyrazolesPyrimidinesReceptor, trkA

Identifiers

PMID34480094
PMCPMC8811064
OpenAlexW3198098407

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.