ArticleGenome biology2021
LeafGo: Leaf to Genome, a quick workflow to produce high-quality de novo plant genomes using long-read sequencing technology.
Article in Genome biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.
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30 citing papers in PubMed, 39 citations in OpenAlex.
- Pan-genome-based resequencing of 2,320 accessions reveals structural variations and accelerates breeding advances in cultivated peanut.Nature genetics · 2026Article
- Expanding the triangle of U: comparative analysis of the Hirschfeldia incana genome provides insights into chromosomal evolution, phylogenomics and high photosynthesis-related traits.Annals of botany · 2026Article
- Haplotype-resolved telomere-to-telomere genome assembly of the hybrid Eucalyptus urophylla × E. grandis.Scientific data · 2026Article
- Improved genome assembly of double haploid Prunus persica siblings 'Lovell 2D' and 'Lovell 5D' and the peach NLRome.Scientific reports · 2026Article
- Haplotype-phased 'Ottawa 3' genome unravels differential reaction of apple rootstock roots to mixed viral infection.The Plant journal : for cell and molecular biology · 2026Article
- Chromosome-level genome assembly and annotation of the Rhinogobio ventralis, an endangered endemic fish from the Yangtze River.Scientific data · 2026Article
- Allele-specific chromatin dynamics underpin heterosis and shoot development in hybrid poplar 'Nanlin895'.Plant molecular biology · 2026Article
- Puzzler: scalable one-command platinum-quality genome assembly from HiFi and Hi-C.Bioinformatics advances · 2026Article
- OfWRKY33 binds to the promoter of key linalool synthase geneHorticulture research · 2025Article
- Chromosome-level haplotype-resolved genome assembly of bread wheat's wild relative Aegilops mutica.Scientific data · 2025Article
- Chromosome-level genome assembly and annotation of largemouth bronze gudgeon (Coreius guichenoti).Scientific data · 2025Article
- Genomic Variability Survey inInternational journal of molecular sciences · 2024Article
- Genome assembly of a diversity panel of Chenopodium quinoa.Scientific data · 2024Article
- Relics of interspecific hybridization retained in the genome of a drought-adapted peanut cultivar.G3 (Bethesda, Md.) · 2024Article
- Unlocking plant genetics with telomere-to-telomere genome assemblies.Nature genetics · 2024Review
- Origin and evolution of the bread wheat D genome.Nature · 2024Article
- Chromosome-level genome assembly of Cnidium monnieri, a highly demanded traditional Chinese medicine.Scientific data · 2024Article
- Genomic, transcriptomic, and metabolomic analyses provide insights into the evolution and development of a medicinal plantHorticulture research · 2024Article
- Chromosome-scale genome assembly of bread wheat's wild relative Triticum timopheevii.Scientific data · 2024Article
- Plasticity of repetitive sequences demonstrated by the complete mitochondrial genome ofFrontiers in plant science · 2024Article
Corrections and comments
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Authors and funding
10 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Currently, different sequencing platforms are used to generate plant genomes and no workflow has been properly developed to optimize time, cost, and assembly quality. We present LeafGo, a complete de novo plant genome workflow, that starts from tissue and produces genomes with modest laboratory and bioinformatic resources in approximately 7 days and using one long-read sequencing technology. LeafGo is optimized with ten different plant species, three of which are used to generate high-quality chromosome-level assemblies without any scaffolding technologies. Finally, we report the diploid genomes of Eucalyptus rudis and E. camaldulensis and the allotetraploid genome of Arachis hypogaea.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.