Evidence map›Paper›PMID 34476330›Full record

ArticleJCO precision oncology2021

Genomic Profiling of Combined Hepatocellular Cholangiocarcinoma Reveals Genomics Similar to Either Hepatocellular Carcinoma or Cholangiocarcinoma.

Karthikeyan Murugesan, Radwa Sharaf, Meagan Montesion, Jay A Moore, James Pao, Dean C Pavlick, Garrett M Frampton, Vivek A Upadhyay, Brian M Alexander, Vincent A Miller and 5 more

Abstract read
In one paragraph

Article in JCO precision oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

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  16. Application of AI on cholangiocarcinoma.Frontiers in oncology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Karthikeyan MurugesanFoundation Medicine Inc, Cambridge, MA.
Radwa SharafFoundation Medicine Inc, Cambridge, MA.
Meagan MontesionFoundation Medicine Inc, Cambridge, MA.
Jay A MooreFoundation Medicine Inc, Cambridge, MA.
James PaoFoundation Medicine Inc, Cambridge, MA.
Dean C PavlickFoundation Medicine Inc, Cambridge, MA.
Garrett M FramptonFoundation Medicine Inc, Cambridge, MA.
Vivek A UpadhyayFoundation Medicine Inc, Cambridge, MA.
Brian M AlexanderFoundation Medicine Inc, Cambridge, MA.
Vincent A MillerFoundation Medicine Inc, Cambridge, MA.
Milind M JavleDepartment of Gastrointestinal Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX.
Tanios S Bekaii SaabMayo Clinic Cancer Center, Phoenix, AZ.
Lee A AlbackerFoundation Medicine Inc, Cambridge, MA.
Jeffrey S RossFoundation Medicine Inc, Cambridge, MA.
Siraj M AliFoundation Medicine Inc, Cambridge, MA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeCombined hepatocellular cholangiocarcinoma (cHCC-CCA) is a rare, aggressive primary liver carcinoma, with morphologic features of both hepatocellular carcinomas (HCC) and liver cholangiocarcinomas (CCA).

methodsThe genomic profiles of 4,975 CCA, 1,470 HCC, and 73 cHCC-CCA cases arising from comprehensive genomic profiling in the course of clinical care were reviewed for genomic alterations (GA), tumor mutational burden, microsatellite instability status, genomic loss of heterozygosity, chromosomal aneuploidy, genomic ancestry, and hepatitis B virus status.

resultsIn cHCC-CCA, GA were most common in

conclusionThese findings demonstrate the use of ML for classification as based on a targeted exome panel used during routine clinical care. Classification of cHCC-CCA by genomic features alone creates insights into the biology of the disease and warrants further investigation for relevance to clinical care.

Indexed as

AdultAgedAged, 80 and overBile Duct NeoplasmsCarcinoma, HepatocellularCholangiocarcinomaFemaleGenomicsHumansLiverLiver NeoplasmsMachine LearningMaleMiddle AgedYoung Adult

Identifiers

PMID34476330
PMCPMC8384404

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.