Evidence map›Paper›PMID 34475859›Full record

ArticleFrontiers in microbiology2021

Whole-Genome Analysis Reveals That the Nucleoid Protein IHF Predominantly Binds to the Replication Origin

Kazutoshi Kasho, Taku Oshima, Onuma Chumsakul, Kensuke Nakamura, Kazuki Fukamachi, Tsutomu Katayama

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Nucleoid-associated proteins: molecular mechanisms in microbial adaptation.World journal of microbiology & biotechnology · 2025
    Review
  7. Article
  8. Review
  9. The TolC and Lipopolysaccharide-SpecificPHAGE (New Rochelle, N.Y.) · 2024
    Article
  10. Review
  11. GeF-seq: A Simple Procedure for Base-Pair Resolution ChIP-seq.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  12. Article
  13. IHF and Fis asInternational journal of molecular sciences · 2023
    Review
  14. Article
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kazutoshi KashoDepartment of Molecular Biology, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka, Japan.
Taku OshimaDepartment of Biotechnology, Toyama Prefectural University, Toyama, Japan.
Onuma ChumsakulGraduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, Japan.
Kensuke NakamuraDepartment of Life Science and Informatics, Maebashi Institute of Technology, Maebashi, Japan.
Kazuki FukamachiDepartment of Biotechnology, Toyama Prefectural University, Toyama, Japan.
Tsutomu KatayamaDepartment of Molecular Biology, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The structure and function of bacterial chromosomes are dynamically regulated by a wide variety of nucleoid-associated proteins (NAPs) and DNA superstructures, such as DNA supercoiling. In

Indexed as

cell cycleEscherichia coliGeF-seqIHForiC

Identifiers

PMID34475859
PMCPMC8407004

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.