Evidence map›Paper›PMID 34475565›Full record

ArticleNature chemical biology2021

Programmed genome editing by a miniature CRISPR-Cas12f nuclease.

Zhaowei Wu, Yifei Zhang, Haopeng Yu, Deng Pan, Yujue Wang, Yannan Wang, Fan Li, Chang Liu, Hao Nan, Weizhong Chen and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 158 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
158citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

158 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Strategy for enhanced production of A40926B0 inSynthetic and systems biotechnology · 2027
    Article
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  6. Review
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  10. CRISPR-Cas9-mediated upregulation of utrophin ameliorates Duchenne muscular dystrophy.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  11. Article
  12. Article
  13. Article
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  17. Review
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  20. Article

98 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Zhaowei WuSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Yifei ZhangSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Haopeng YuDepartment of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, UK.ORCID http://orcid.org/0000-0002-5184-2430
Deng PanSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Yujue WangSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Yannan WangSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Fan LiSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Chang LiuSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China.ORCID http://orcid.org/0000-0002-9393-101X
Hao NanCollege of Life Sciences, Northwest A&F University, Yangling, China.
Weizhong ChenSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Quanjiang JiSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China. quanjiangji@shanghaitech.edu.cn.ORCID http://orcid.org/0000-0002-2321-8462

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The RNA-guided CRISPR-associated (Cas) nucleases are versatile tools for genome editing in various organisms. The large sizes of the commonly used Cas9 and Cas12a nucleases restrict their flexibility in therapeutic applications that use the cargo-size-limited adeno-associated virus delivery vehicle. More compact systems would thus offer more therapeutic options and functionality for this field. Here, we report a miniature class 2 type V-F CRISPR-Cas genome-editing system from Acidibacillus sulfuroxidans (AsCas12f1, 422 amino acids). AsCas12f1 is an RNA-guided endonuclease that recognizes 5' T-rich protospacer adjacent motifs and creates staggered double-stranded breaks to target DNA. We show that AsCas12f1 functions as an effective genome-editing tool in both bacteria and human cells using various delivery methods, including plasmid, ribonucleoprotein and adeno-associated virus. The small size of AsCas12f1 offers advantages for cellular delivery, and characterizations of AsCas12f1 may facilitate engineering more compact genome-manipulation technologies.

Indexed as

BacillalesBacterial ProteinsCRISPR-Associated ProteinsGene EditingBacterial ProteinsCRISPR-Associated Proteins

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.