Evidence map›Paper›PMID 34475283›Full record

ArticleJournal of synchrotron radiation2021

Single-particle cryo-EM: alternative schemes to improve dose efficiency.

Yue Zhang, Peng Han Lu, Enzo Rotunno, Filippo Troiani, J Paul van Schayck, Amir H Tavabi, Rafal E Dunin-Borkowski, Vincenzo Grillo, Peter J Peters, Raimond B G Ravelli

Open access · hybridAbstract read
In one paragraph

Article in Journal of synchrotron radiation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
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  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Yue ZhangMaastricht Multimodal Molecular Imaging Institute, Division of Nanoscopy, Maastricht University, Universiteitssingel 50, Maastricht 6229 ER, The Netherlands.ORCID 0000-0003-4482-1866
Peng Han LuErnst Ruska-Centre for Microscopy and Spectroscopy with Electrons and Peter Grünberg Institute, Forschungszentrum Jülich, Jülich 52425, Germany.
Enzo RotunnoCNR-Istituto Nanoscienze, Centro S3, Via G Campi 213/A, I-41125 Modena, Italy.
Filippo TroianiCNR-Istituto Nanoscienze, Centro S3, Via G Campi 213/A, I-41125 Modena, Italy.
J Paul van SchayckMaastricht Multimodal Molecular Imaging Institute, Division of Nanoscopy, Maastricht University, Universiteitssingel 50, Maastricht 6229 ER, The Netherlands.ORCID 0000-0001-6591-4637
Amir H TavabiErnst Ruska-Centre for Microscopy and Spectroscopy with Electrons and Peter Grünberg Institute, Forschungszentrum Jülich, Jülich 52425, Germany.
Rafal E Dunin-BorkowskiErnst Ruska-Centre for Microscopy and Spectroscopy with Electrons and Peter Grünberg Institute, Forschungszentrum Jülich, Jülich 52425, Germany.ORCID 0000-0001-8082-0647
Vincenzo GrilloCNR-Istituto Nanoscienze, Centro S3, Via G Campi 213/A, I-41125 Modena, Italy.
Peter J PetersMaastricht Multimodal Molecular Imaging Institute, Division of Nanoscopy, Maastricht University, Universiteitssingel 50, Maastricht 6229 ER, The Netherlands.ORCID 0000-0002-2964-5684
Raimond B G RavelliMaastricht Multimodal Molecular Imaging Institute, Division of Nanoscopy, Maastricht University, Universiteitssingel 50, Maastricht 6229 ER, The Netherlands.ORCID 0000-0001-6056-5888
Maastricht University · NLForschungszentrum Jülich · DEIstituto Nanoscienze · IT

Funding

European Commission, Horizon 2020 Framework Programme 766970
6 · The paper itself

Abstract

Imaging of biomolecules by ionizing radiation, such as electrons, causes radiation damage which introduces structural and compositional changes of the specimen. The total number of high-energy electrons per surface area that can be used for imaging in cryogenic electron microscopy (cryo-EM) is severely restricted due to radiation damage, resulting in low signal-to-noise ratios (SNR). High resolution details are dampened by the transfer function of the microscope and detector, and are the first to be lost as radiation damage alters the individual molecules which are presumed to be identical during averaging. As a consequence, radiation damage puts a limit on the particle size and sample heterogeneity with which electron microscopy (EM) can deal. Since a transmission EM (TEM) image is formed from the scattering process of the electron by the specimen interaction potential, radiation damage is inevitable. However, we can aim to maximize the information transfer for a given dose and increase the SNR by finding alternatives to the conventional phase-contrast cryo-EM techniques. Here some alternative transmission electron microscopy techniques are reviewed, including phase plate, multi-pass transmission electron microscopy, off-axis holography, ptychography and a quantum sorter. Their prospects for providing more or complementary structural information within the limited lifetime of the sample are discussed.

Indexed as

Cryoelectron MicroscopyElectronsMacromolecular SubstancesSignal-To-Noise RatioStructure-Activity RelationshipMacromolecular Substancesholographymulti-pass TEMphase plateptychographyquantum sorter

Identifiers

PMID34475283
PMCPMC8415325
OpenAlexW3198001383

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.