Evidence map›Paper›PMID 34475218›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Sorting for secreted molecule production using a biosensor-in-microdroplet approach.

Emily K Bowman, James M Wagner, Shuo-Fu Yuan, Matthew Deaner, Claire M Palmer, Simon D'Oelsnitz, Lauren Cordova, Xin Li, Frank F Craig, Hal S Alper

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
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  14. Elucidation of Sequence-Function Relationships for an Improved BiobutanolFrontiers in bioengineering and biotechnology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Emily K BowmanInterdisciplinary Life Sciences Graduate Program, The University of Texas at Austin, Austin, TX 78712.ORCID 0000-0002-2896-3285
James M WagnerMcKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712.
Shuo-Fu YuanInterdisciplinary Life Sciences Graduate Program, The University of Texas at Austin, Austin, TX 78712.
Matthew DeanerMcKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712.
Claire M PalmerInterdisciplinary Life Sciences Graduate Program, The University of Texas at Austin, Austin, TX 78712.ORCID 0000-0002-1581-159X
Simon D'OelsnitzInterdisciplinary Life Sciences Graduate Program, The University of Texas at Austin, Austin, TX 78712.ORCID 0000-0001-7512-9157
Lauren CordovaMcKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712.ORCID 0000-0002-5505-1898
Xin LiSphere Fluidics Limited, Cambridge CB21 6GP, United Kingdom.
Frank F CraigSphere Fluidics Limited, Cambridge CB21 6GP, United Kingdom.
Hal S AlperInterdisciplinary Life Sciences Graduate Program, The University of Texas at Austin, Austin, TX 78712; halper@che.utexas.edu.ORCID 0000-0002-8246-8605

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorting large libraries of cells for improved small molecule secretion is throughput limited. Here, we combine producer/secretor cell libraries with whole-cell biosensors using a microfluidic-based screening workflow. This approach enables a mix-and-match capability using off-the-shelf biosensors through either coencapsulation or pico-injection. We demonstrate the cell type and library agnostic nature of this workflow by utilizing single-guide RNA, transposon, and ethyl-methyl sulfonate mutagenesis libraries across three distinct microbes (

Indexed as

Biosensing TechniquesEscherichia coliFluorescenceHigh-Throughput Screening AssaysLevodopaMicrofluidicsMutagenesisSaccharomyces cerevisiaeYarrowiaLevodopabiosensorhigh-throughput screeningmetabolic engineeringmicrofluidicspico-injection

Identifiers

PMID34475218
PMCPMC8433520

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.