Evidence map›Paper›PMID 34474086›Full record

ArticleJournal of molecular biology2021

Activation of the PDGF β Receptor by a Persistent Artificial Signal Peptide.

Lisa M Petti, Benjamin N Koleske, Daniel DiMaio

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 92% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Lisa M PettiDepartment of Genetics, Yale School of Medicine, PO Box 208005, New Haven, CT 06520-8005, USA.
Benjamin N KoleskeDepartment of Genetics, Yale School of Medicine, PO Box 208005, New Haven, CT 06520-8005, USA; Department of Molecular Biophysics & Biochemistry, Yale School of Medicine, PO Box 208024, New Haven, CT 06520-8024, USA.
Daniel DiMaioDepartment of Genetics, Yale School of Medicine, PO Box 208005, New Haven, CT 06520-8005, USA; Department of Molecular Biophysics & Biochemistry, Yale School of Medicine, PO Box 208024, New Haven, CT 06520-8024, USA; Department of Therapeutic Radiology, Yale School of Medicine, PO Box 208040, New Haven, CT 06520-8040, USA; Yale Cancer Center, PO Box 208028, New Haven, CT 06520-8028, USA. Electronic address: daniel.dimaio@yale.edu.
Yale University · US

Funding

CELL TRANSFORMATION BY BOVINE PAPILLOMAVIRUSR01CA037157 · NCI · YALE UNIVERSITY · PI DIMAIO, DANIEL C. · 1985 to 2019
$9.9M
CELL TRANSFORMATION BY BOVINE PAPILLOMAVIRUSR37CA037157 · NCI · YALE UNIVERSITY · PI DIMAIO, DANIEL · 1992 to 1999
–
NCI NIH HHS R01 CA037157NCI NIH HHS R37 CA037157
6 · The paper itself

Abstract

Most eukaryotic transmembrane and secreted proteins contain N-terminal signal peptides that mediate insertion of the nascent translation products into the membrane of the endoplasmic reticulum. After membrane insertion, signal peptides typically are cleaved from the mature protein and degraded. Here, we tested whether a small hydrophobic protein selected for growth promoting activity in mammalian cells retained transforming activity while also acting as a signal peptide. We replaced the signal peptide of the PDGF β receptor (PDGFβR) with a previously described 29-residue artificial transmembrane protein named 9C3 that can activate the PDGFβR in trans. We showed that a modified version of 9C3 at the N-terminus of the PDGFβR can function as a signal peptide, as assessed by its ability to support high level expression, glycosylation, and cell surface localization of the PDGFβR. The 9C3 signal peptide retains its ability to interact with the transmembrane domain of the PDGFβR and cause receptor activation and cell proliferation. Cleavage of the 9C3 signal peptide from the mature receptor is not required for these activities. However, signal peptide cleavage does occur in some molecules, and the cleaved signal peptide can persist in cells and activate a co-expressed PDGFβR in trans. Our finding that a hydrophobic sequence can display signal peptide and transforming activity suggest that some naturally occurring signal peptides may also display additional biological activities by interacting with the transmembrane domains of target proteins.

Indexed as

Amino Acid SequenceAnimalsB-LymphocytesCell LineCell ProliferationGene ExpressionGlycosylationHydrophobic and Hydrophilic InteractionsInterleukin-3MiceMutationProtein EngineeringProtein Sorting SignalsReceptor, Platelet-Derived Growth Factor betaSignal TransductionStructure-Activity RelationshipInterleukin-3Protein Sorting SignalsReceptor, Platelet-Derived Growth Factor betaE5 proteinReceptor tyrosine kinaseTransmembrane domainTransmembrane proteinTraptamer

Identifiers

PMID34474086
PMCPMC8530902
OpenAlexW3197241368

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.