Evidence map›Paper›PMID 34474016›Full record

ArticleBiophysical journal2021

UV Resonance Raman explores protein structural modification upon fibrillation and ligand interaction.

Maria Pachetti, Francesco D'Amico, Lorella Pascolo, Stefania Pucciarelli, Alessandro Gessini, Pietro Parisse, Lisa Vaccari, Claudio Masciovecchio

Open access · greenAbstract read
In one paragraph

Article in Biophysical journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Maria PachettiElettra - Sincrotrone Trieste, Trieste, Italy; Department of Physics, University of Trieste, Trieste, Italy; Institute for Maternal and Child Health, IRCCS Burlo Garofolo, Trieste, Italy. Electronic address: maria.pachetti@burlo.trieste.it.
Francesco D'AmicoElettra - Sincrotrone Trieste, Trieste, Italy.
Lorella PascoloInstitute for Maternal and Child Health, IRCCS Burlo Garofolo, Trieste, Italy.
Stefania PucciarelliUniversity of Camerino, School of Biosciences and Veterinary Medicine, Camerino, Italy.
Alessandro GessiniElettra - Sincrotrone Trieste, Trieste, Italy.
Pietro ParisseElettra - Sincrotrone Trieste, Trieste, Italy; Istituto Officina dei Materiali - CNR (IOM-CNR), Trieste, Italy.
Lisa VaccariElettra - Sincrotrone Trieste, Trieste, Italy. Electronic address: lisa.vaccari@elettra.eu.
Claudio MasciovecchioElettra - Sincrotrone Trieste, Trieste, Italy. Electronic address: claudio.masciovecchio@elettra.eu.
Elettra-Sincrotrone Trieste S.C.p.A. · ITIRCCS Materno Infantile Burlo Garofolo · ITUniversità di Camerino · ITUniversity of Trieste · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amyloids are proteinaceous deposits considered an underlying pathological hallmark of several degenerative diseases. The mechanism of amyloid formation and its inhibition still represent challenging issues, especially when protein structure cannot be investigated by classical biophysical techniques as for the intrinsically disordered proteins (IDPs). In this view, the need to find an alternative way for providing molecular and structural information regarding IDPs prompted us to set a novel, to our knowledge, approach focused on UV Resonance Raman (UVRR) spectroscopy. To test its applicability, we study the fibrillation of hen-egg white lysozyme (HEWL) and insulin as well as their interaction with resveratrol, employing also intrinsic fluorescence spectroscopy, Fourier transform infrared (FTIR) spectroscopy, and atomic force microscopy (AFM). The increasing of the β-sheet structure content at the end of protein fibrillation probed by FTIR occurs simultaneously with a major solvent exposure of tryptophan (Trp) and tyrosine (Tyr) residues of HEWL and insulin, respectively, as revealed by UVRR and intrinsic fluorescence spectroscopy. However, because the latter technique is successfully used when proteins naturally contain Trp residues, it shows poor performances in the case of insulin, and the information regarding its tertiary structure is exclusively provided by UVRR spectroscopy. The presence of an increased concentration of resveratrol induces mild changes in the secondary structure of both protein fibrils while remodeling HEWL fibril length and promoting the formation of amorphous aggregates in the case of insulin. Although the intrinsic fluorescence spectra of proteins are hidden by resveratrol signal, UVRR Trp and Tyr bands are resonantly enhanced, showing a good sensitivity to the presence of resveratrol and marking a modification in the noncovalent interactions in which they are involved. Our findings demonstrate that UVRR is successfully employed in the study of aggregation-prone proteins and of their interaction with ligands, especially in the case of Trp-lacking proteins.

Indexed as

ChickensIntrinsically Disordered ProteinsAmyloidAnimalsFemaleLigandsProtein Structure, SecondaryAmyloidIntrinsically Disordered ProteinsLigands

Identifiers

PMID34474016
PMCPMC8553600
OpenAlexW3198385476

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.