Evidence map›Paper›PMID 34473901›Full record

ArticleImmunity, inflammation and disease2021

Study on the contrast of the MHC-peptide interaction of B2/B21 haplotype and MHC-related virus resistance in chickens.

Yuan-Chang Jin, Wei Wang, Min-Min Yu, Mei-Lin Hao, Gang Zeng, Jing-Fen Chen, Juan Dai, Yu-Jie Wu

Open access · goldAbstract read
In one paragraph

Article in Immunity, inflammation and disease, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yuan-Chang JinCollege of Biology and Agriculture (College of Food Science and Technology), Zunyi Normal College, Zunyi, Guizhou, China.ORCID 0000-0001-9204-5852
Wei WangSchool of Life Science, Hunan University of Science and Technology, Xiangtan, Hunan, China.
Min-Min YuCollege of Biology and Agriculture (College of Food Science and Technology), Zunyi Normal College, Zunyi, Guizhou, China.
Mei-Lin HaoCollege of Biology and Agriculture (College of Food Science and Technology), Zunyi Normal College, Zunyi, Guizhou, China.
Gang ZengCollege of Biology and Agriculture (College of Food Science and Technology), Zunyi Normal College, Zunyi, Guizhou, China.
Jing-Fen ChenCollege of Biology and Agriculture (College of Food Science and Technology), Zunyi Normal College, Zunyi, Guizhou, China.
Juan DaiCollege of Biology and Agriculture (College of Food Science and Technology), Zunyi Normal College, Zunyi, Guizhou, China.
Yu-Jie WuCollege of Biology and Agriculture (College of Food Science and Technology), Zunyi Normal College, Zunyi, Guizhou, China.
Zunyi Normal College · CNHunan University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThree-dimensional (3D) structures of MHC class I exert some influence by the MHC-peptide interaction over host resistance to the virus. The thesis aims at studying the connection between MHC-peptide interaction of B2/B21 haplotype and MHC-related resistance to the virus.

methodsThe structure of chicken MHC class I BF2*0201 from B2 haplotype was studied and contrasted with that of BF2*2101 from B21 haplotype by using DNAMAN and PyMol software.

resultsThe amino acid difference resulted in the difference in size and changeability of the binding groove of the two, resulting in different choices on the binding polypeptide. 3bew's (the crystal structure of BF2*2101 bound to peptide RV10) small side chain His111 replaces the short side chain Tyr111 of 4cvx (the crystal structure of BF2*0201 bound to peptide YL9), and the very small amino acid of Ser69 and Ser97 make the middle of the 3bew's binding groove become apparently broad and bound restrictive of amino acid smaller. Moreover, due to the specific amino acids-Arg9, Asp24, and Asp73 of 4cvx and Arg9, Asp24, and His111 of 3bew, the effect of the polypeptide and the binding groove differ between the two, and 3bew tends to bind polypeptides with negatively charged amino acids, but the large space in the middle can also accommodate other amino acids. Contrasted with the binding groove characteristic of 4cvx, it can be said that the selectivity of 3bew is higher than that of 4cvx in the amino acid type of the binding polypeptide, so the B21 haplotype has more host resistance to the virus than that of the B2 haplotype in chicken.

conclusionThere are usually various kinds of peptides presented by the BF2*2101 molecules of B21 haplotypes, resulting in resistance to pathogenic microorganisms, such as Rous sarcoma virus and/or Marek's disease virus. These findings may have an important theoretical foundation for screening of virus antigen, vaccine design, and genetic resistance breeding.

Indexed as

ChickensGenes, MHC Class IAnimalsHaplotypesPeptidesPeptidesantigen presentationchickenMHC I-related moleculesvirus resistance

Identifiers

PMID34473901
PMCPMC8589374
OpenAlexW3196941057

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.