Evidence map›Paper›PMID 34469728›Full record

ArticleCell reports2021

pre-piRNA trimming and 2'-O-methylation protect piRNAs from 3' tailing and degradation in C. elegans.

Benjamin Pastore, Hannah L Hertz, Ian F Price, Wen Tang

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
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  4. Reproductive phasiRNAs are the piRNAs of plants.Trends in genetics : TIG · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Benjamin PastoreDepartment of Biological Chemistry and Pharmacology, Columbus, OH 43210, USA; Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA; Ohio State Biochemistry Program, Columbus, OH 43210, USA.
Hannah L HertzDepartment of Biological Chemistry and Pharmacology, Columbus, OH 43210, USA; Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA.
Ian F PriceDepartment of Biological Chemistry and Pharmacology, Columbus, OH 43210, USA; Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA; Ohio State Biochemistry Program, Columbus, OH 43210, USA.
Wen TangDepartment of Biological Chemistry and Pharmacology, Columbus, OH 43210, USA; Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA. Electronic address: tang.542@osu.edu.
The Ohio State University · US

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Jennifer A. Woyach · 1985 to 2026
$132.3M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Heritable macromolecules in C. elegans germ granulesR35GM142580 · NIGMS · OHIO STATE UNIVERSITY · PI TANG, WEN · 2021 to 2025
$2.0M
Biogenesis of piRNA and its function in endogenous gene regulationR00GM124460 · NIGMS · OHIO STATE UNIVERSITY · PI TANG, WEN · 2019 to 2021
$747k
Ultra-Low and Single-Cell Transcriptome Analysis in Patient-Derived Rare CLL Precursor CellsR50CA211524 · NCI · OHIO STATE UNIVERSITY · PI YAN, PEARLLY · 2016 to 2020
$745k
NCI NIH HHS P30 CA016058NCI NIH HHS R50 CA211524NIGMS NIH HHS R00 GM124460NIGMS NIH HHS R35 GM142580NIH HHS P40 OD010440
6 · The paper itself

Abstract

The Piwi-interacting RNA (piRNA) pathway suppresses transposable elements and promotes fertility in diverse organisms. Maturation of piRNAs involves pre-piRNA trimming followed by 2'-O-methylation at their 3' termini. Here, we report that the 3' termini of Caenorhabditis elegans piRNAs are subject to nontemplated nucleotide addition, and piRNAs with 3' addition exhibit extensive base-pairing interaction with their target RNAs. Animals deficient for PARN-1 (pre-piRNA trimmer) and HENN-1 (2'-O-methyltransferase) accumulate piRNAs with 3' nontemplated nucleotides. In henn-1 mutants, piRNAs are shortened prior to 3' addition, whereas long isoforms of untrimmed piRNAs are preferentially modified in parn-1 mutant animals. Loss of either PARN-1 or HENN-1 results in modest reduction in steady-state levels of piRNAs. Deletion of both enzymes leads to depletion of piRNAs, desilenced piRNA targets, and impaired fecundity. Together, our findings suggest that pre-piRNA trimming and 2'-O-methylation act collaboratively to protect piRNAs from tailing and degradation.

Indexed as

RNA Processing, Post-TranscriptionalRNA StabilityAnimalsAnimals, Genetically ModifiedArgonaute ProteinsCaenorhabditis elegansCaenorhabditis elegans ProteinsExoribonucleasesFertilityMethylationMethyltransferasesRNA PrecursorsRNA, Small InterferingArgonaute ProteinsCaenorhabditis elegans ProteinsExoribonucleasesHENN-1 protein, C elegansMethyltransferasesRNA PrecursorsRNA, Small Interfering22G-RNAs2′-O-methylationC. elegansnontemplated nucleotide additionpiRNAsPiwi proteinpre-piRNA trimming

Identifiers

PMID34469728
PMCPMC8459939
OpenAlexW3197788972

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.