Evidence map›Paper›PMID 34465770›Full record

ArticleNature communications2021

Changes in the distribution of fitness effects and adaptive mutational spectra following a single first step towards adaptation.

Dimitra Aggeli, Yuping Li, Gavin Sherlock

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
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  4. Review
  5. Structural and evolutionary constraints of organophosphate resistance in dipteran carboxylesterases.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
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  8. Article
  9. Ecological diversification in rapidly evolving populations.bioRxiv : the preprint server for biology · 2025
    Article
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  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Dimitra Aggeli *Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Yuping Li *Department of Biology, Stanford University, Stanford, CA, USA.ORCID 0000-0003-2057-3271
Gavin SherlockDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA. gsherloc@stanford.edu.ORCID 0000-0002-1692-4983

Funding

Multisizer 4e - equipment for "Fitness Effects of Beneficial Mutations"R35GM131824 · NIGMS · STANFORD UNIVERSITY · PI Gavin J Sherlock · 2019 to 2026
$3.6M
NIGMS NIH HHS R35 GM131824
6 · The paper itself

Abstract

Historical contingency and diminishing returns epistasis have been typically studied for relatively divergent genotypes and/or over long evolutionary timescales. Here, we use Saccharomyces cerevisiae to study the extent of diminishing returns and the changes in the adaptive mutational spectra following a single first adaptive mutational step. We further evolve three clones that arose under identical conditions from a common ancestor. We follow their evolutionary dynamics by lineage tracking and determine adaptive outcomes using fitness assays and whole genome sequencing. We find that diminishing returns manifests as smaller fitness gains during the 2

Indexed as

Adaptation, PhysiologicalEvolution, MolecularGenetic FitnessGenome, FungalModels, GeneticMutationSaccharomyces cerevisiae

Identifiers

PMID34465770
PMCPMC8408183

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.