Evidence map›Paper›PMID 34465597›Full record

ArticleJournal for immunotherapy of cancer2021

CD4+ T cell and M2 macrophage infiltration predict dedifferentiated liposarcoma patient outcomes.

Brett A Schroeder, Natalie A LaFranzo, Bonnie J LaFleur, Rachel M Gittelman, Marissa Vignali, Shihong Zhang, Kevin C Flanagan, Julie Rytlewski, Laura Riolobos, Brian C Schulte and 10 more

Open access · goldAbstract read
In one paragraph

Article in Journal for immunotherapy of cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 40 citations in OpenAlex.

  1. A Phase 1/2 Trial Combining Avelumab and Trabectedin for Advanced Liposarcoma and Leiomyosarcoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 12 institutions in 2 countries.

Brett A SchroederNational Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.ORCID 0000-0001-6019-2022
Natalie A LaFranzoCofactor Genomics, San Francisco, California, USA.
Bonnie J LaFleurBIO5 Institute, University of Arizona, Tucson, Arizona, USA.
Rachel M GittelmanAdaptive Biotechnologies Corp, Seattle, Washington, USA.
Marissa VignaliAdaptive Biotechnologies Corp, Seattle, Washington, USA.
Shihong ZhangClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.ORCID 0000-0003-1373-2668
Kevin C FlanaganCofactor Genomics, San Francisco, California, USA.
Julie RytlewskiBristol Myers Squibb, Seattle, Washington, USA.
Laura RiolobosUW Medicine Cancer Vaccine Institute, University of Washington, Seattle, Washington, USA.
Brian C SchulteDivision of Oncology, Northwestern University Department of Medicine, Chicago, Illinois, USA.
Teresa S KimDepartment of Surgery, University of Washington, Seattle, Washington, USA.ORCID 0000-0002-6040-7748
Eleanor ChenDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, Washington, USA.
Kimberly S SmytheClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Michael J WagnerClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.ORCID 0000-0002-0753-9282
Jose G MantillaPathology, University of Washington Medical Center, Seattle, Washington, USA.
Jean S CampbellSensei Bio, Boston, Massachusetts, USA.
Robert H PierceClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.ORCID 0000-0002-2677-144X
Robin L JonesSarcoma, Royal Marsden Hospital NHS Trust, London, UK.
Lee D CranmerSeattle Cancer Care Alliance, Seattle, Washington, USA.
Seth M PollackClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA Seth.pollack@northwestern.edu.ORCID 0000-0002-2466-0607
University of Washington · USFred Hutch Cancer Center · USAdaptive Biotechnologies (United States) · USCofactor Genomics (United States) · USNorthwestern University · USBristol-Myers Squibb (United States) · USNational Institutes of Health · USRoyal Marsden Hospital · GBSeattle Cancer Care Alliance · USSensei Biotherapeutics (United States) · USUniversity of Arizona · USUniversity of Washington Medical Center · US

Funding

Novel IL-12 Gene Delivery Vehicles for Transformation of Solid TumorsR01CA244872 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI POLLACK, SETH M · 2020 to 2024
$2.5M
NCI NIH HHS R01 CA244872
6 · The paper itself

Abstract

backgroundDedifferentiated liposarcoma (DDLPS) is one of the most common soft tissue sarcoma subtypes and is devastating in the advanced/metastatic stage. Despite the observation of clinical responses to

methodsWe performed a retrospective study of 61 patients with DDLPS. We completed deep sequencing of the T-cell receptor (TCR) β-chain and RNA sequencing for predictive modeling, evaluating both immune markers and tumor escape genes. Hierarchical clustering and recursive partitioning were employed to elucidate relationships of cellular infiltrates within the tumor microenvironment, while an immune score for single markers was created as a predictive tool.

resultsAlthough many DDLPS samples had low TCR clonality, high TCR clonality combined with low T-cell fraction predicted lower 3-year overall survival (p=0.05). Higher levels of CD14+ monocytes (p=0.02) inversely correlated with 3-year recurrence-free survival (RFS), while CD4+ T-cell infiltration (p=0.05) was associated with a higher RFS. Genes associated with longer RFS included

conclusionsImmune cell infiltration predicts clinical outcome in DDLPS, with CD4+ cells associated with better outcomes; CD14+ cells and M2 macrophages are associated with worse outcomes. Future checkpoint inhibitor studies in DDLPS should incorporate immunosequencing and gene expression profiling techniques that can generate immune landscape profiles.

Indexed as

AdolescentAdultAgedAged, 80 and overCD4-Positive T-LymphocytesCell DifferentiationChildChild, PreschoolFemaleHumansInfantInfant, NewbornLiposarcomaMacrophagesMaleMiddle AgedCD4-positive T-lymphocytesimmunitymacrophagessarcomatumor microenvironment

Identifiers

PMID34465597
PMCPMC8413967
OpenAlexW3196563977

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.