Evidence map›Paper›PMID 34465023›Full record

ArticlemBio2021

Enhanced Virus Detection and Metagenomic Sequencing in Patients with Meningitis and Encephalitis.

Anne Piantadosi, Shibani S Mukerji, Simon Ye, Michael J Leone, Lisa M Freimark, Daniel Park, Gordon Adams, Jacob Lemieux, Sanjat Kanjilal, Isaac H Solomon and 12 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 1 pooled it
10.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 1 synthesis or guideline pooled it, 114 citations in OpenAlex.

  1. Pooled it
  2. Observational
  3. Article
  4. [Clinical value of cerebrospinal fluid metagenomic next-generation sequencing in the diagnosis of neonatal intracranial infection].Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2026
    Observational
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Integrating metagenomics and metatranscriptomics intoThe Journal of general virology · 2026
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Metagenomic next-generation sequencing: new horizons in microbiology.Frontiers in cellular and infection microbiology · 2026
    Review
  20. Article

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 1 country.

Anne Piantadosi *Broad Institutegrid.66859.34 of MIT and Harvard, Cambridge, Massachusetts, USA.
Shibani S Mukerji *Department of Neurology, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Simon Ye *Broad Institutegrid.66859.34 of MIT and Harvard, Cambridge, Massachusetts, USA.
Michael J LeoneDepartment of Neurology, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Lisa M FreimarkBroad Institutegrid.66859.34 of MIT and Harvard, Cambridge, Massachusetts, USA.
Daniel ParkBroad Institutegrid.66859.34 of MIT and Harvard, Cambridge, Massachusetts, USA.
Gordon AdamsBroad Institutegrid.66859.34 of MIT and Harvard, Cambridge, Massachusetts, USA.
Jacob LemieuxBroad Institutegrid.66859.34 of MIT and Harvard, Cambridge, Massachusetts, USA.
Sanjat KanjilalDivision of Infectious Diseases, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Isaac H SolomonHarvard Medical School, Boston, Massachusetts, USA.
Asim A AhmedHarvard Medical School, Boston, Massachusetts, USA.
Robert GoldsteinDivision of Infectious Diseases, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Vijay GaneshBroad Institutegrid.66859.34 of MIT and Harvard, Cambridge, Massachusetts, USA.
Bridget OstremDepartment of Neurology, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Kaelyn C CumminsDivision of Infectious Diseases, Brigham and Women's Hospital, Boston, Massachusetts, USA.
Jesse M ThonDepartment of Neurology, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Cormac M KinsellaBroad Institutegrid.66859.34 of MIT and Harvard, Cambridge, Massachusetts, USA.
Eric RosenbergDivision of Infectious Diseases, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Matthew P FroschDepartment of Neurology, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Marcia B GoldbergDivision of Infectious Diseases, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Tracey A Cho *Department of Neurology, Massachusetts General Hospitalgrid.32224.35, Boston, Massachusetts, USA.
Pardis Sabeti *Broad Institutegrid.66859.34 of MIT and Harvard, Cambridge, Massachusetts, USA.
Broad Institute · USHarvard University · USBrigham and Women's Hospital · USBoston Children's Hospital · USMassachusetts General Hospital · USUniversity of Iowa · US

Funding

The impact of HIV viral diversity and cellular immunity on HIV pathogenesisP30AI060354 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI RAJESH T GANDHI · 2004 to 2026
$94.4M
INFECTIOUS DISEASE AND BASIC MICROBIOLOGICAL MECHANISMST32AI007061 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI Marcia B Goldberg · 1985 to 2026
$12.1M
Institutional Career Development CoreKL2TR002542 · NCATS · HARVARD MEDICAL SCHOOL · PI BREDELLA, MIRIAM ANTOINETTE, RUTKOVE, SEWARD B. · 2018 to 2022
$8.7M
Immune Activation, Cerebral Metabolic Activity and Depression in Treated HIV-InfectionK23MH115812 · NIMH · MASSACHUSETTS GENERAL HOSPITAL · PI MUKERJI, SHIBANI SHARON · 2018 to 2022
$926k
Clinical and viral genomic approaches to evaluate the emergence of Powassan virusK08AI139348 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI PIANTADOSI, ANNE L · 2019 to 2022
$752k
NCATS NIH HHS KL2 TR002542NIAID NIH HHS K08 AI139348NIAID NIH HHS P30 AI060354NIMH NIH HHS K23 MH115812
6 · The paper itself

Abstract

Meningitis and encephalitis are leading causes of central nervous system (CNS) disease and often result in severe neurological compromise or death. Traditional diagnostic workflows largely rely on pathogen-specific tests, sometimes over days to weeks, whereas metagenomic next-generation sequencing (mNGS) profiles all nucleic acid in a sample. In this single-center, prospective study, 68 hospitalized patients with known (

Indexed as

MetagenomeAdultAgedCentral Nervous System Viral DiseasesEncephalitisFemaleHigh-Throughput Nucleotide SequencingHumansMaleMeningitisMetagenomicsMiddle AgedProspective StudiesVirusesencephalitishybrid capturemeningitismetagenomic sequencingmethylated DNA depletionnext-generation sequencing (NGS)virus

Identifiers

PMID34465023
PMCPMC8406231
OpenAlexW3196342433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.