Evidence map›Paper›PMID 34464491›Full record

ArticleAngewandte Chemie (International ed. in English)2021

High-Affinity Dimeric Aptamers Enable the Rapid Electrochemical Detection of Wild-Type and B.1.1.7 SARS-CoV-2 in Unprocessed Saliva.

Zijie Zhang, Richa Pandey, Jiuxing Li, Jimmy Gu, Dawn White, Hannah D Stacey, Jann C Ang, Catherine-Jean Steinberg, Alfredo Capretta, Carlos D M Filipe and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 1 pooled it
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 1 synthesis or guideline pooled it, 166 citations in OpenAlex.

  1. Application of aptamers in regenerative medicine.Frontiers in bioengineering and biotechnology · 2022
    Pooled it
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  20. Signal-Amplified Nanobiosensors for Virus Detection Using Advanced Nanomaterials.Advances in biochemical engineering/biotechnology · 2024
    Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 2 countries.

Zijie ZhangDepartment of Biochemistry and Biomedical Sciences, McMaster University, Canada.
Richa PandeyDepartment of Engineering Physics, McMaster University, Canada.
Jiuxing LiDepartment of Biochemistry and Biomedical Sciences, McMaster University, Canada.ORCID 0000-0001-7012-2482
Jimmy GuDepartment of Biochemistry and Biomedical Sciences, McMaster University, Canada.
Dawn WhiteBiointerfaces Institute, McMaster University, Canada.
Hannah D StaceyDepartment of Biochemistry and Biomedical Sciences, McMaster University, Canada.
Jann C AngDepartment of Biochemistry and Biomedical Sciences, McMaster University, Canada.
Catherine-Jean SteinbergDepartment of Medicine, McMaster University, Canada.
Alfredo CaprettaBiointerfaces Institute, McMaster University, Canada.
Carlos D M FilipeDepartment of Chemical Engineering, McMaster University, Canada.
Karen MossmanMichael G. DeGroote Institute of Infectious Disease Research, McMaster University, Canada.ORCID 0000-0002-1725-5873
Cynthia BalionDepartment of Pathology and Molecular Medicine, McMaster University, Canada.
Matthew S MillerDepartment of Biochemistry and Biomedical Sciences, McMaster University, Canada.ORCID 0000-0003-3426-5069
Bruno J SalenaDepartment of Medicine, McMaster University, Canada.ORCID 0000-0002-2348-8497
Deborah YamamuraMichael G. DeGroote Institute of Infectious Disease Research, McMaster University, Canada.
Leyla SoleymaniDepartment of Engineering Physics, McMaster University, Canada.
John D BrennanBiointerfaces Institute, McMaster University, Canada.ORCID 0000-0003-3461-9824
Yingfu LiDepartment of Biochemistry and Biomedical Sciences, McMaster University, Canada.ORCID 0000-0002-7533-6743
McMaster University · CABioSurfaces (United States) · USMcMaster University Medical Centre · CA

Funding

Institute of Infection and Immunity 446898
6 · The paper itself

Abstract

We report a simple and rapid saliva-based SARS-CoV-2 antigen test that utilizes a newly developed dimeric DNA aptamer, denoted as DSA1N5, that specifically recognizes the spike proteins of the wildtype virus and its Alpha and Delta variants with dissociation constants of 120, 290 and 480 pM, respectively, and binds pseudotyped lentiviruses expressing the wildtype and alpha trimeric spike proteins with affinity constants of 2.1 pM and 2.3 pM, respectively. To develop a highly sensitive test, DSA1N5 was immobilized onto gold electrodes to produce an electrochemical impedance sensor, which was capable of detecting 1000 viral particles per mL in 1:1 diluted saliva in under 10 min without any further sample processing. Evaluation of 36 positive and 37 negative patient saliva samples produced a clinical sensitivity of 80.5 % and specificity of 100 % and the sensor could detect the wildtype virus as well as the Alpha and Delta variants in the patient samples, which is the first reported rapid test that can detect any emerging variant of SARS-CoV-2.

Indexed as

Biosensing TechniquesCOVID-19 Serological TestingElectrochemical TechniquesAntigens, ViralAptamers, NucleotideHumansSalivaSARS-CoV-2Antigens, ViralAptamers, NucleotideaptamersCOVID-19electrochemical biosensorsrapid testssaliva

Identifiers

PMID34464491
PMCPMC8596624
OpenAlexW3196702900

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.