Evidence map›Paper›PMID 34463482›Full record

ArticleACS synthetic biology2021

Modular and Single-Cell Sensors of Bacterial Ser/Thr Kinase Activity.

Christine R Zheng, Abhyudai Singh, Alexandra Libby, Pamela A Silver, Elizabeth A Libby

Open access · greenAbstract read
In one paragraph

Article in ACS synthetic biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Staying in the loop to make ends meet: roles and regulation of GlmR inbioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Christine R ZhengDepartment of Systems Biology, Harvard Medical School, Boston, Massachusetts 02115, United States.
Abhyudai SinghElectrical and Computer Engineering, University of Delaware, Newark, Delaware 19716, United States.
Alexandra LibbyPrinceton Neuroscience Institute, Princeton University, Princeton, New Jersey 08544, United States.
Pamela A SilverDepartment of Systems Biology, Harvard Medical School, Boston, Massachusetts 02115, United States.ORCID 0000-0002-7856-4071
Elizabeth A LibbyDepartment of Systems Biology, Harvard Medical School, Boston, Massachusetts 02115, United States.ORCID 0000-0003-2374-1015
Harvard University · USPrinceton University · USUniversity of Delaware · US

Funding

Consequences and Control of Randomness in Timing of Intracellular EventsR01GM124446 · NIGMS · UNIVERSITY OF DELAWARE · PI SINGH, ABHYUDAI · 2017 to 2020
$914k
NIGMS NIH HHS R01 GM124446
6 · The paper itself

Abstract

At the single-cell level, protein kinase activity is typically inferred from downstream transcriptional reporters. However, promoters are often coregulated by several pathways, making the activity of a specific kinase difficult to deconvolve. Here, we present modular, direct, and specific sensors of bacterial kinase activity, including FRET-based sensors, as well as a synthetic transcription factor based on the lactose repressor (LacI) that has been engineered to respond to phosphorylation. We demonstrate the utility of these sensors in measuring the activity of PrkC, a conserved bacterial Ser/Thr kinase, in different growth conditions from single cells to colonies. We also show that PrkC activity increases in response to a cell-wall active antibiotic that blocks the late steps in peptidoglycan synthesis (cefotaxime), but not the early steps (fosfomycin). These sensors have a modular design that should generalize to other bacterial signaling systems in the future.

Indexed as

Bacterial ProteinsCefotaximeFluorescence Resonance Energy TransferGram-Positive BacteriaLac RepressorsPhosphorylationProtein Serine-Threonine KinasesSingle-Cell AnalysisBacterial ProteinsCefotaximeLac RepressorsProtein Serine-Threonine KinasesFRETGram-positive bacteriaLacIphosphorylationSer/Thr kinaseβ-lactam

Identifiers

PMID34463482
PMCPMC8498941
OpenAlexW3196361662

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.