Evidence map›Paper›PMID 34462284›Full record

ArticleCancer immunology research2021

Targeting the Atf7ip-Setdb1 Complex Augments Antitumor Immunity by Boosting Tumor Immunogenicity.

Hai Hu, Alireza Khodadadi-Jamayran, Igor Dolgalev, Hyunwoo Cho, Sana Badri, Luis A Chiriboga, Briana Zeck, Miguel Lopez De Rodas Gregorio, Catríona M Dowling, Kristen Labbe and 23 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer immunology research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 38 citations in OpenAlex.

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  13. The Roles of H3K9me3 Writers, Readers, and Erasers in Cancer Immunotherapy.International journal of molecular sciences · 2024
    Review
  14. Article
  15. In vivo CRISPR screens identifyProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 8 institutions in 4 countries.

Hai HuDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.
Alireza Khodadadi-JamayranDivision of Advanced Research Technologies, Applied Bioinformatics Laboratories and Genome Technology Center, NYU School of Medicine, New York, New York.ORCID 0000-0003-2495-7504
Igor DolgalevDivision of Advanced Research Technologies, Applied Bioinformatics Laboratories and Genome Technology Center, NYU School of Medicine, New York, New York.ORCID 0000-0003-4451-126X
Hyunwoo ChoDivision of Advanced Research Technologies, Applied Bioinformatics Laboratories and Genome Technology Center, NYU School of Medicine, New York, New York.
Sana BadriDepartment of Pathology, NYU School of Medicine, New York, New York.
Luis A ChiribogaDepartment of Pathology, NYU School of Medicine, New York, New York.ORCID 0000-0002-2028-6873
Briana ZeckDepartment of Pathology, NYU School of Medicine, New York, New York.
Miguel Lopez De Rodas GregorioDepartment of Pathology, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0002-6062-4064
Catríona M DowlingDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.ORCID 0000-0001-7887-9332
Kristen LabbeDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.
Jiehui DengDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.ORCID 0000-0001-7986-8643
Ting ChenDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.ORCID 0000-0003-1725-7956
Hua ZhangDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.
Paul ZappileDivision of Advanced Research Technologies, Genome Technology Center, NYU School of Medicine, New York, New York.
Ze ChenDepartment of Medicine, NYU School of Medicine, New York.
Beatrix UeberheideProteomics Laboratory, NYU School of Medicine, New York, New York.
Angeliki KaratzaDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.
Han HanDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.
Michela RanieriDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.
Sittinon TangDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.
George JourDepartment of Pathology, NYU School of Medicine, New York, New York.
Iman OsmanDepartment of Dermatology, NYU School of Medicine, New York, New York.
Antje SuckerDepartment of Dermatology, University Hospital, Essen, Germany.
Dirk SchadendorfDepartment of Dermatology, University Hospital, Essen, Germany.ORCID 0000-0003-3524-7858
Aristotelis TsirigosDivision of Advanced Research Technologies, Applied Bioinformatics Laboratories and Genome Technology Center, NYU School of Medicine, New York, New York.ORCID 0000-0002-7512-8477
Kurt A SchalperDepartment of Pathology, Yale University School of Medicine, New Haven, Connecticut.
Vamsidhar VelchetiDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.
Hsin-Yi HuangDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.
Yujuan JinState Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai, China.
Hongbin JiState Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai, China.ORCID 0000-0003-0891-6390
John T PoirierDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York.ORCID 0000-0001-9795-5644
Fei LiDepartment of Pathology, School of Basic Medical Sciences, Fudan University, Shanghai, China. kwok-kin.wong@nyulangone.org lifei@fudan.edu.cn.
Kwok-Kin WongDivision of Hematology and Medical Oncology, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine, New York, New York. kwok-kin.wong@nyulangone.org lifei@fudan.edu.cn.
NYU Langone Health · USNew York University · USNew York Genome Center · USCenter for Excellence in Molecular Cell Science · CNEssen University Hospital · DEYale University · USShanghai Medical College of Fudan University · CNUniversity of Limerick · IE

Funding

Response and resistance to SHP2 inhibitors alone and in combination in Non-Small Cell Lung CancerR01CA248896 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NEEL, BENJAMIN G., WONG, KWOK KIN · 2021 to 2025
$3.4M
Targeting novel therapeutic vulnerabilities in LKB1 mutant tumors.R01CA219670 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI EL-BARDEESY, NABEEL, WONG, KWOK KIN · 2018 to 2022
$3.4M
Dectin-1 signaling drives pancreatic oncogenesis by inducing macrophage-mediated adaptive immune suppressionR01CA215471 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BAR-SAGI, DAFNA, WONG, KWOK KIN · 2018 to 2022
$2.3M
NCI NIH HHS R01 CA215471NCI NIH HHS R01 CA219670NCI NIH HHS R01 CA248896
6 · The paper itself

Abstract

Substantial progress has been made in understanding how tumors escape immune surveillance. However, few measures to counteract tumor immune evasion have been developed. Suppression of tumor antigen expression is a common adaptive mechanism that cancers use to evade detection and destruction by the immune system. Epigenetic modifications play a critical role in various aspects of immune invasion, including the regulation of tumor antigen expression. To identify epigenetic regulators of tumor antigen expression, we established a transplantable syngeneic tumor model of immune escape with silenced antigen expression and used this system as a platform for a CRISPR-Cas9 suppressor screen for genes encoding epigenetic modifiers. We found that disruption of the genes encoding either of the chromatin modifiers activating transcription factor 7-interacting protein (Atf7ip) or its interacting partner SET domain bifurcated histone lysine methyltransferase 1 (Setdb1) in tumor cells restored tumor antigen expression. This resulted in augmented tumor immunogenicity concomitant with elevated endogenous retroviral (ERV) antigens and mRNA intron retention. ERV disinhibition was associated with a robust type I interferon response and increased T-cell infiltration, leading to rejection of cells lacking intact

Indexed as

AnimalsAntigens, NeoplasmCell Culture TechniquesCell LineCell ProliferationHistone-Lysine N-MethyltransferaseHumansMiceMice, NudeNeoplasmsRepressor ProteinsAntigens, NeoplasmAtf7ip protein, mouseHistone-Lysine N-MethyltransferaseRepressor ProteinsSETDB1 protein, mouse

Identifiers

PMID34462284
PMCPMC9414288
OpenAlexW3196499966

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.