ArticleSTAR protocols2021
A high-throughput DNA FISH protocol to visualize genome regions in human cells.
Article in STAR protocols, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
17 citing papers in PubMed.
- Re-establishment of TAD boundary organization during DNA replication.bioRxiv : the preprint server for biology · 2026Article
- TAD boundaries and gene activity are uncoupled.eLife · 2026Article
- TAD boundaries and gene activity are uncoupled.bioRxiv : the preprint server for biology · 2026Article
- BeadBuddy: user-friendly, nanometer-scale registration of single-molecule imaging data.bioRxiv : the preprint server for biology · 2025Article
- Article
- Unveiling the invisible genomic dynamics.Experimental & molecular medicine · 2025Review
- Three-color single-molecule localization microscopy in chromatin.Light, science & applications · 2025Article
- Tn5-Labeled DNA-FISH: An Optimized Probe Preparation Method for Probing Genome Architecture.International journal of molecular sciences · 2025Article
- Cell type- and transcription-independent spatial proximity between enhancers and promoters.Molecular biology of the cell · 2024Article
- Allele-level visualization of transcription and chromatin by high-throughput imaging.Histochemistry and cell biology · 2024Article
- From feulgen to modern methods: marking a century of DNA imaging advances.Histochemistry and cell biology · 2024Review
- Allele-level visualization of transcription and chromatin by high-throughput imaging.Research square · 2024Article
- Allele-level visualization of transcription and chromatin by high-throughput imaging.bioRxiv : the preprint server for biology · 2024Article
- Formamide denaturation of double-stranded DNA for fluorescence in situ hybridization (FISH) distorts nanoscale chromatin structure.PloS one · 2024Article
- Article
- Nuclear position modulates long-range chromatin interactions.PLoS genetics · 2022Article
- Efficient DNA fluorescence labeling via base excision trapping.Nature communications · 2022Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Here, we describe an end-to-end high-throughput imaging protocol to visualize genomic loci in cells at high throughput using DNA fluorescence
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.