Evidence map›Paper›PMID 34458755›Full record

ArticleRSC chemical biology2020

Glycosylated cyclophellitol-derived activity-based probes and inhibitors for cellulases.

Casper de Boer, Nicholas G S McGregor, Evert Peterse, Sybrin P Schröder, Bogdan I Florea, Jianbing Jiang, Jos Reijngoud, Arthur F J Ram, Gilles P van Wezel, Gijsbert A van der Marel and 3 more

Erratum issuedAbstract read
In one paragraph

Article in RSC chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. ACS central science · 2024
    Article
  7. Microbiology spectrum · 2024
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Design, Synthesis and Structural Analysis of Glucocerebrosidase Imaging Agents.Chemistry (Weinheim an der Bergstrasse, Germany) · 2021
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Casper de BoerLeiden Institute of Chemistry, Leiden University Einsteinweg 55 2300 RA Leiden The Netherlands h.s.overkleeft@chem.leidenuniv.nl.ORCID https://orcid.org/0000-0002-0869-6060
Nicholas G S McGregorYork Structural Biology Laboratory, Department of Chemistry, The University of York Heslington York YO10 5DD UK Gideon.davies@york.ac.uk.
Evert PeterseLeiden Institute of Chemistry, Leiden University Einsteinweg 55 2300 RA Leiden The Netherlands h.s.overkleeft@chem.leidenuniv.nl.
Sybrin P SchröderLeiden Institute of Chemistry, Leiden University Einsteinweg 55 2300 RA Leiden The Netherlands h.s.overkleeft@chem.leidenuniv.nl.
Bogdan I FloreaLeiden Institute of Chemistry, Leiden University Einsteinweg 55 2300 RA Leiden The Netherlands h.s.overkleeft@chem.leidenuniv.nl.
Jianbing JiangLeiden Institute of Chemistry, Leiden University Einsteinweg 55 2300 RA Leiden The Netherlands h.s.overkleeft@chem.leidenuniv.nl.
Jos ReijngoudInstitute of Biology Leiden, Leiden University Sylviusweg 72 2333 BE Leiden The Netherlands.
Arthur F J RamInstitute of Biology Leiden, Leiden University Sylviusweg 72 2333 BE Leiden The Netherlands.
Gilles P van WezelInstitute of Biology Leiden, Leiden University Sylviusweg 72 2333 BE Leiden The Netherlands.ORCID https://orcid.org/0000-0003-0341-1561
Gijsbert A van der MarelLeiden Institute of Chemistry, Leiden University Einsteinweg 55 2300 RA Leiden The Netherlands h.s.overkleeft@chem.leidenuniv.nl.
Jeroen D C CodéeLeiden Institute of Chemistry, Leiden University Einsteinweg 55 2300 RA Leiden The Netherlands h.s.overkleeft@chem.leidenuniv.nl.ORCID https://orcid.org/0000-0003-3531-2138
Herman S OverkleeftLeiden Institute of Chemistry, Leiden University Einsteinweg 55 2300 RA Leiden The Netherlands h.s.overkleeft@chem.leidenuniv.nl.ORCID https://orcid.org/0000-0001-6976-7005
Gideon J DaviesYork Structural Biology Laboratory, Department of Chemistry, The University of York Heslington York YO10 5DD UK Gideon.davies@york.ac.uk.ORCID https://orcid.org/0000-0002-7343-776X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cellulases and related β-1,4-glucanases are essential components of lignocellulose-degrading enzyme mixtures. The detection of β-1,4-glucanase activity typically relies on monitoring the breakdown of purified lignocellulose-derived substrates or synthetic chromogenic substrates, limiting the activities which can be detected and complicating the tracing of activity back to specific components within complex enzyme mixtures. As a tool for the rapid detection and identification of β-1,4-glucanases, a series of glycosylated cyclophellitol inhibitors mimicking β-1,4-glucan oligosaccharides have been synthesised. These compounds are highly efficient inhibitors of HiCel7B, a well-known GH7

Identifiers

PMID34458755
PMCPMC8341922

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.