Evidence map›Paper›PMID 34458688›Full record

ArticleJournal for the measurement of physical behaviour2021

Application of Convolutional Neural Network Algorithms for Advancing Sedentary and Activity Bout Classification.

Supun Nakandala, Marta M Jankowska, Fatima Tuz-Zahra, John Bellettiere, Jordan A Carlson, Andrea Z LaCroix, Sheri J Hartman, Dori E Rosenberg, Jingjing Zou, Arun Kumar and 1 more

Abstract read
In one paragraph

Article in Journal for the measurement of physical behaviour, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Machine learning used to study risk factors for chronic diseases: A scoping review.Canadian journal of public health = Revue canadienne de sante publique · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Observational
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Supun NakandalaDepartment of Computer Science and Engineering, University of California San Diego, La Jolla, CA, USA.
Marta M JankowskaQualcomm Institute/Calit2, University of California San Diego, La Jolla, CA, USA.
Fatima Tuz-ZahraThe Herbert Wertheim School of Public Health and Human Longevity Science, University of California San Diego, La Jolla, CA, USA.
John BellettiereThe Herbert Wertheim School of Public Health and Human Longevity Science, University of California San Diego, La Jolla, CA, USA.
Jordan A CarlsonCenter for Children's Healthy Lifestyles and Nutrition, Children's Mercy Hospital, Kansas City, MO, USA, and the Department of Pediatrics, Children's Mercy Hospital and University of Missouri Kansas City, Kansas City, MO, USA.
Andrea Z LaCroixThe Herbert Wertheim School of Public Health and Human Longevity Science, University of California San Diego, La Jolla, CA, USA.
Sheri J HartmanThe Herbert Wertheim School of Public Health and Human Longevity Science, University of California San Diego, La Jolla, CA, USA.
Dori E RosenbergKaiser Permanente Washington Health Research Institute, Seattle, WA, USA.
Jingjing ZouThe Herbert Wertheim School of Public Health and Human Longevity Science, University of California San Diego, La Jolla, CA, USA.
Arun KumarDepartment of Computer Science and Engineering, University of California San Diego, La Jolla, CA, USA.
Loki NatarajanThe Herbert Wertheim School of Public Health and Human Longevity Science, University of California San Diego, La Jolla, CA, USA.

Funding

Novel computational techniques to detect the relationship between sitting patterns and metabolic syndrome in existing cohort studies.R01DK114945 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NATARAJAN, LOKI · 2018 to 2021
$2.6M
NIDDK NIH HHS R01 DK114945
6 · The paper itself

Abstract

backgroundMachine learning has been used for classification of physical behavior bouts from hip-worn accelerometers; however, this research has been limited due to the challenges of directly observing and coding human behavior "in the wild." Deep learning algorithms, such as convolutional neural networks (CNNs), may offer better representation of data than other machine learning algorithms without the need for engineered features and may be better suited to dealing with free-living data. The purpose of this study was to develop a modeling pipeline for evaluation of a CNN model on a free-living data set and compare CNN inputs and results with the commonly used machine learning random forest and logistic regression algorithms.

methodTwenty-eight free-living women wore an ActiGraph GT3X+accelerometer on their right hip for 7 days. A concurrently worn thigh-mounted activPAL device captured ground truth activity labels. The authors evaluated logistic regression, random forest, and CNN models for classifying sitting, standing, and stepping bouts. The authors also assessed the benefit of performing feature engineering for this task.

resultsThe CNN classifier performed best (average balanced accuracy for bout classification of sitting, standing, and stepping was 84%) compared with the other methods (56% for logistic regression and 76% for random forest), even without performing any feature engineering.

conclusionUsing the recent advancements in deep neural networks, the authors showed that a CNN model can outperform other methods even without feature engineering. This has important implications for both the model's ability to deal with the complexity of free-living data and its potential transferability to new populations.

Indexed as

ActiGraphactivity classificationactivPALfeature engineeringfree living

Identifiers

PMID34458688
PMCPMC8389343

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.