Evidence map›Paper›PMID 34458573›Full record

ArticlePeerJ. Computer science2021

An automated method to enrich consumer health vocabularies using GloVe word embeddings and an auxiliary lexical resource.

Mohammed Ibrahim, Susan Gauch, Omar Salman, Mohammed Alqahtani

Open access · goldAbstract read
In one paragraph

Article in PeerJ. Computer science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Mohammed IbrahimComputer Science and Computer Engineering, University of Arkansas at Fayetteville, Fayetteville, AR, United States.ORCID 0000-0001-6842-3745
Susan GauchComputer Science and Computer Engineering, University of Arkansas at Fayetteville, Fayetteville, AR, United States.
Omar SalmanComputer Science and Computer Engineering, University of Arkansas at Fayetteville, Fayetteville, AR, United States.ORCID 0000-0003-4797-6927
Mohammed AlqahtaniComputer Science and Computer Engineering, University of Arkansas at Fayetteville, Fayetteville, AR, United States.
University of Arkansas at Fayetteville · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundClear language makes communication easier between any two parties. A layman may have difficulty communicating with a professional due to not understanding the specialized terms common to the domain. In healthcare, it is rare to find a layman knowledgeable in medical terminology which can lead to poor understanding of their condition and/or treatment. To bridge this gap, several professional vocabularies and ontologies have been created to map laymen medical terms to professional medical terms and vice versa.

objectiveMany of the presented vocabularies are built manually or semi-automatically requiring large investments of time and human effort and consequently the slow growth of these vocabularies. In this paper, we present an automatic method to enrich laymen's vocabularies that has the benefit of being able to be applied to vocabularies in any domain.

methodsOur entirely automatic approach uses machine learning, specifically Global Vectors for Word Embeddings (GloVe), on a corpus collected from a social media healthcare platform to extend and enhance consumer health vocabularies. Our approach further improves the consumer health vocabularies by incorporating synonyms and hyponyms from the WordNet ontology. The basic GloVe and our novel algorithms incorporating WordNet were evaluated using two laymen datasets from the National Library of Medicine (NLM), Open-Access Consumer Health Vocabulary (OAC CHV) and MedlinePlus Healthcare Vocabulary.

resultsThe results show that GloVe was able to find new laymen terms with an F-score of 48.44%. Furthermore, our enhanced GloVe approach outperformed basic GloVe with an average F-score of 61%, a relative improvement of 25%. Furthermore, the enhanced GloVe showed a statistical significance over the two ground truth datasets with

conclusionsThis paper presents an automatic approach to enrich consumer health vocabularies using the GloVe word embeddings and an auxiliary lexical source, WordNet. Our approach was evaluated used healthcare text downloaded from

Indexed as

Consumer health vocabularyOntologiesVocabulary enrichmentWord embedding

Identifiers

PMID34458573
PMCPMC8371999
OpenAlexW3190282032

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.