Evidence map›Paper›PMID 34454972›Full record

ArticleVirus research2021

Phylogenetic reconstruction of the initial stages of the spread of the SARS-CoV-2 virus in the Eurasian and American continents by analyzing genomic data.

Yu S Bukin, A N Bondaryuk, N V Kulakova, S V Balakhonov, Y P Dzhioev, V I Zlobin

Open access · greenAbstract readHistorical Article
In one paragraph

Article in Virus research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  8. Covid-19: Early Cases and Disease Spread.Annals of global health · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Yu S BukinLimnological Institute Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya str., 3, Irkutsk 664033, Russia. Electronic address: bukinyura@mail.ru.
A N BondaryukLimnological Institute Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya str., 3, Irkutsk 664033, Russia; Irkutsk Antiplague Research Institute of Siberia and Far East, Trilisser str., 78, Irkutsk 664047, Russia.
N V KulakovaLimnological Institute Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya str., 3, Irkutsk 664033, Russia.
S V BalakhonovIrkutsk Antiplague Research Institute of Siberia and Far East, Trilisser str., 78, Irkutsk 664047, Russia.
Y P DzhioevIrkutsk State Medical University, Krasnogo Vosstaniya str., 1, Irkutsk 664003, Russia.
V I ZlobinIrkutsk State Medical University, Krasnogo Vosstaniya str., 1, Irkutsk 664003, Russia.
Siberian Branch of the Russian Academy of Sciences · RUIrkutsk State Medical University · RUIrkutsk Antiplague Research Institute of Siberia and Far East · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Samples from complete genomes of SARS-CoV-2 isolated during the first wave (December 2019-July 2020) of the global COVID-19 pandemic from 21 countries (Asia, Europe, Middle East and America) around the world, were analyzed using the phylogenetic method with molecular clock dating. Results showed that the first cases of COVID-19 in the human population appeared in the period between July and November 2019 in China. The spread of the virus into other countries of the world began in the autumn of 2019. In mid-February 2020, the virus appeared in all the countries we analyzed. During this time, the global population of SARS-CoV-2 was characterized by low levels of the genetic polymorphism, making it difficult to accurately assess the pathways of infection. The rate of evolution of the coding region of the SARS-CoV-2 genome equal to 7.3 × 10

Indexed as

Evolution, MolecularGenome, ViralMutation RateAnimalsAsiaChiropteraCOVID-19EuropeGenomicsHistory, 20th CenturyHistory, 21st CenturyHumansMiddle EastNorth AmericaPhylogenyPolymorphism, GeneticCOVID-19Evolutionary rateGenomicsMolecular clockSARS-CoV-2Virus spread

Identifiers

PMID34454972
PMCPMC8388146
OpenAlexW3193302818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.