Evidence map›Paper›PMID 34453001›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Classifying mobile genetic elements and their interactions from sequence data: The importance of existing biological knowledge.

Sally R Partridge, Virve I Enne, Elisabeth Grohmann, Ruth M Hall, Julian I Rood, Paul H Roy, Christopher M Thomas, Neville Firth

Abstract readLetterComment
PubMed Full text at PMC Publisher
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Towards quantifying plasmid similarity.Microbial genomics · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Reply to Partridge et al.: Complementary bioinformatics and experimental approaches to investigate the transfer of AMR genes.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Sally R PartridgeCentre for Infectious Diseases and Microbiology, The Westmead Institute for Medical Research, The University of Sydney and Westmead Hospital, Westmead, NSW 2145, Australia; sally.partridge@health.nsw.gov.au neville.firth@sydney.edu.au.
Virve I EnneCentre for Clinical Microbiology, Division of Infection and Immunity, University College London, London NW3 2PF, United Kingdom.
Elisabeth GrohmannSchool of Life Sciences and Technology, Beuth University of Applied Sciences Berlin, 13347 Berlin, Germany.
Ruth M HallSchool of Life and Environmental Sciences, University of Sydney, Sydney, NSW 2006, Australia.
Julian I RoodInfection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.ORCID 0000-0003-2126-7209
Paul H RoyCentre de Recherche en Infectiologie, Université Laval, Québec, QC G1V 4G2, Canada.ORCID 0000-0003-3526-3997
Christopher M ThomasInstitute of Microbiology and Infection, School of Biosciences, University of Birmingham, Edgbaston, B15 2TT, United Kingdom.
Neville FirthSchool of Life and Environmental Sciences, University of Sydney, Sydney, NSW 2006, Australia; sally.partridge@health.nsw.gov.au neville.firth@sydney.edu.au.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

DNA Transposable ElementsDNA Transposable Elements

Identifiers

PMID34453001
PMCPMC8536329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.