Evidence map›Paper›PMID 34452995›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Hierarchy of signaling thresholds downstream of the T cell receptor and the Tec kinase ITK.

Michael P Gallagher, James M Conley, Pranitha Vangala, Manuel Garber, Andrea Reboldi, Leslie J Berg

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
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  7. Food preservative tBHQ modulates Th17/TCurrent research in toxicology · 2026
    Article
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  11. HEB Restrains Effector Gene Expression during Early CD8Molecular and cellular biology · 2025
    Article
  12. Article
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  15. Article
  16. Article
  17. Article
  18. Antigen perception in T cells by long-term Erk and NFAT signaling dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Michael P GallagherDepartment of Pathology, University of Massachusetts Medical School, Worcester, MA 01605.ORCID 0000-0002-7799-0546
James M ConleyDepartment of Immunology and Microbiology, University of Colorado Anschutz School of Medicine, Aurora, CO 80045.ORCID 0000-0001-8901-4713
Pranitha VangalaProgram in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA 01605.
Manuel GarberProgram in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA 01605.
Andrea ReboldiDepartment of Pathology, University of Massachusetts Medical School, Worcester, MA 01605.
Leslie J BergDepartment of Pathology, University of Massachusetts Medical School, Worcester, MA 01605; leslie.berg@cuanschutz.edu.ORCID 0000-0003-0899-8541
University of Massachusetts Chan Medical School · USUniversity of Colorado Anschutz Medical Campus · US

Funding

TRAINING IN IMMUNOLOGY (COMPETITIVE RENEWAL OF AI07439)T32AI007349 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI STERN, LAWRENCE J. · 1989 to 2024
$4.5M
TCR signaling control of thymic Treg selection and immune homeostasisR01AI143976 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BERG, LESLIE JOAN, HUSEBY, ERIC S · 2020 to 2024
$2.9M
Interplay of Regulatory Innate T Cells and Pathogenic T Clonotypes In DermatitisR01AR071269 · NIAMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI HUSEBY, ERIC S, KANG, JOONSOO · 2017 to 2021
$2.9M
Dissecting the pathways controlling tunable responses to TCR signalingR01AI132419 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BERG, LESLIE JOAN · 2018 to 2022
$2.5M
NIAID NIH HHS R01 AI132419NIAID NIH HHS R01 AI143976NIAID NIH HHS T32 AI007349NIAMS NIH HHS R01 AR071269
6 · The paper itself

Abstract

The strength of peptide:MHC interactions with the T cell receptor (TCR) is correlated with the time to first cell division, the relative scale of the effector cell response, and the graded expression of activation-associated proteins like IRF4. To regulate T cell activation programming, the TCR and the TCR proximal interleukin-2-inducible T cell kinase (ITK) simultaneously trigger many biochemically separate signaling cascades. T cells lacking ITK exhibit selective impairments in effector T cell responses after activation, but under the strongest signaling conditions, ITK activity is dispensable. To gain insight into whether TCR signal strength and ITK activity tune observed graded gene expression through the unequal activation of distinct signaling pathways, we examined Erk1/2 phosphorylation or nuclear factor of activated T cells (NFAT) and nuclear factor (NF)-κB translocation in naïve OT-I CD8

Indexed as

Signal TransductionAnimalsCells, CulturedDNAFemaleGene Expression RegulationLymphocyte ActivationMaleMAP Kinase Signaling SystemMiceNFATC Transcription FactorsNF-kappa BProtein-Tyrosine KinasesReceptors, Antigen, T-CellT-LymphocytesDNAemt protein-tyrosine kinaseNfatc2 protein, mouseNFATC Transcription FactorsNF-kappa BProtein-Tyrosine KinasesReceptors, Antigen, T-CellTec protein-tyrosine kinaseITKNFATNF-κBT cell activationT cell receptor signaling

Identifiers

PMID34452995
PMCPMC8536361
OpenAlexW3194459937

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.