Evidence map›Paper›PMID 34452563›Full record

ArticleAsian Pacific journal of cancer prevention : APJCP2021

Effect of Lysyl Oxidase G473 A Polymorphism on Lysyl Oxidase and Total Soluble Collagen Expression in Oral Submucous Fibrosis.

Sanjit Mukherjee, Atul Katarkar, Richa Dhariwal, Sweta Mohanty, Basudev Mahato, Jay Gopal Ray, Keya Chaudhuri

Open access · goldAbstract read
In one paragraph

Article in Asian Pacific journal of cancer prevention : APJCP, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Serum and salivary Cu/Zn ratio as a diagnostic biomarker for oral submucosal fibrosis: an analysis of trace metals and LOX gene variants.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2024
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sanjit MukherjeeCSIR-Indian Institute of Chemical Biology, Kolkata, India.ORCID 0000-0002-3295-9668
Atul KatarkarCSIR-Indian Institute of Chemical Biology, Kolkata, India.
Richa DhariwalDepartment of Oral Pathology, Dr. R. Ahmed Dental College and Hospital, Kolkata, India.
Sweta MohantyDepartment of Oral Pathology, Dr. R. Ahmed Dental College and Hospital, Kolkata, India.
Basudev MahatoDepartment of Oral Pathology, Dr. R. Ahmed Dental College and Hospital, Kolkata, India.
Jay Gopal RayDepartment of Oral Pathology, Dr. R. Ahmed Dental College and Hospital, Kolkata, India.
Keya ChaudhuriCSIR-Indian Institute of Chemical Biology, Kolkata, India.
Dr. R. Ahmed Dental College and Hospital · INIndian Institute of Chemical Biology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOral submucous fibrosis (OSF) is a debilitating collagen-metabolic disorder leading to submucosal fibrosis and trismus. Lysyl oxidase (LOX), a critical collagen biosynthetic enzyme, is up-regulated in OSF. Polymorphisms in the Lysyl oxidase gene have been associated with increased risk of OSF and might affect normal collagen synthesis, accumulation, or degradation, crucial in determining fibrosis severity.

methodsOne hundred OSF cases and 100 controls were genotyped for LOX G473A(Arg158Gln) polymorphism by polymerase chain reaction-restriction fragment length polymorphism. The expression of LOX was estimated both by quantitative mRNA analysis and western blot. Total soluble collagen was evaluated from mucosal tissue obtained from OSF cases. Immunohistochemical (IHC) localization of type 1 collagen was performed in mucosal tissue obtained from patients carrying various genotypes.

resultsHeterozygous G473A genotype was significantly higher in OSF cases [2.063(95% CI =1.059-4.016)], among 26-40 years age-group [4.375(95% CI=1.323-14.267),p=0.029] and in male patients [2.38 (95% CI= 1.107-5.121), p= 0.042]. LOX expression was significantly higher in cases of the heterozygous or homozygous carrier (p <0.001). We found the total soluble collagen level significantly (p <0.001) higher among patients carrying GA or AA genotype. IHC revealed focal deposition of type1 collagen in the submucosal tissue; comparatively higher deposition was evident in mucosal tissue of OSF patients carrying AA genotype.

conclusionsThese findings suggest LOX G473A polymorphism confers an increased risk of OSF and may affect collagen accumulation in OSF cases.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAdolescentAdultCase-Control StudiesChildChild, PreschoolCollagenFemaleFollow-Up StudiesHumansIndiaInfantInfant, NewbornMaleOral Submucous FibrosisCollagenLOX protein, humanProtein-Lysine 6-Oxidasecollagenlysyl oxidaseOral submucous fibrosisSingle nucleotide polymorphism

Identifiers

PMID34452563
PMCPMC8629460
OpenAlexW3194603302

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.