Evidence map›Paper›PMID 34452432›Full record

ArticleViruses2021

Gut Microbiome Changes Associated with Epithelial Barrier Damage and Systemic Inflammation during Antiretroviral Therapy of Chronic SIV Infection.

Ceylan Tanes, Edith M Walker, Nadia Slisarenko, Giovanni L Gerrets, Brooke F Grasperge, Xuebin Qin, S Michal Jazwinski, Frederic D Bushman, Kyle Bittinger, Namita Rout

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Acta pharmaceutica Sinica. B · 2024
    Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Ceylan TanesDivision of Gastroenterology, Hepatology and Nutrition, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Edith M WalkerDivision of Microbiology, Tulane National Primate Research Center, Tulane University, Covington, LA 70433, USA.
Nadia SlisarenkoDivision of Microbiology, Tulane National Primate Research Center, Tulane University, Covington, LA 70433, USA.
Giovanni L GerretsDivision of Microbiology, Tulane National Primate Research Center, Tulane University, Covington, LA 70433, USA.
Brooke F GraspergeDivision of Veterinary Medicine, Tulane National Primate Research Center, Tulane University, Covington, LA 70433, USA.
Xuebin QinDivision of Comparative Pathology, Tulane National Primate Research Center, Tulane University, Covington, LA 70433, USA.
S Michal JazwinskiTulane Center for Aging, Tulane University School of Medicine, New Orleans, LA 70112, USA.
Frederic D BushmanDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Kyle BittingerDivision of Gastroenterology, Hepatology and Nutrition, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Namita RoutDivision of Microbiology, Tulane National Primate Research Center, Tulane University, Covington, LA 70433, USA.
Tulane University · USChildren's Hospital of Philadelphia · USUniversity of Pennsylvania · US

Funding

Tulane NPRC SPF Sheltered Outdoor Enclosure ExpansionP51OD011104 · OD · TULANE UNIVERSITY OF LOUISIANA · PI L Lee HAMM · 2012 to 2026
$142.4M
The role of the CMV-associated reactive oxygen species in age-relatedP20GM103629 · NIGMS · TULANE UNIVERSITY OF LOUISIANA · PI ROUT, NAMITA · 2012 to 2021
$22.4M
Genetically Modified Gamma Delta T Cells to Target SIV ReservoirsR21AI136100 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI ROUT, NAMITA · 2018 to 2019
$460k
NIGMS NIH HHS P20 GM103629NIH HHS P51 OD011104
6 · The paper itself

Abstract

Gut dysbiosis is a common feature associated with the chronic inflammation of HIV infection. Toward understanding the interplay of chronic treated HIV infection, dysbiosis, and systemic inflammation, we investigated longitudinal fecal microbiome changes and plasma inflammatory markers in the nonhuman primate model. Following simian immunodeficiency virus (SIV) infection in rhesus macaques, significant changes were observed in several members of the phylum Firmicutes along with an increase in Bacteroidetes. Viral suppression with antiretroviral therapy (ART) resulted in an early but partial recovery of compositional changes and butyrate producing genes in the gut microbiome. Over the course of chronic SIV infection and long-term ART, however, the specific loss of

Indexed as

AnimalsAnti-Retroviral AgentsBacteriaChronic DiseaseDysbiosisFemaleGastrointestinal MicrobiomeInflammationIntestinal MucosaMacaca mulattaSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusAnti-Retroviral AgentsARTIFABPLBPmacaquesmicrobiomesCD14SIV

Identifiers

PMID34452432
PMCPMC8402875
OpenAlexW3190518580

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.