Evidence map›Paper›PMID 34451545›Full record

ArticlePlants (Basel, Switzerland)2021

Image-Based Wheat Fungi Diseases Identification by Deep Learning.

Mikhail A Genaev, Ekaterina S Skolotneva, Elena I Gultyaeva, Elena A Orlova, Nina P Bechtold, Dmitry A Afonnikov

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
17.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 127 citations in OpenAlex.

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  18. A Review on Multiscale-Deep-Learning Applications.Sensors (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Mikhail A GenaevInstitute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia.
Ekaterina S SkolotnevaInstitute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia.
Elena I GultyaevaAll Russian Institute of Plant Protection, Pushkin, 196608 St. Petersburg, Russia.ORCID 0000-0001-7948-0307
Elena A OrlovaSiberian Research Institute of Plant Production and Breeding, Branch of the Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, 630501 Krasnoobsk, Russia.
Nina P BechtoldSiberian Research Institute of Plant Production and Breeding, Branch of the Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, 630501 Krasnoobsk, Russia.
Dmitry A AfonnikovInstitute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia.ORCID 0000-0001-9738-1409
Novosibirsk State University · RURussian Academy of Sciences · RUAll-Russian Institute of Plant Protection · RU

Funding

Ministry of Education and Science of the Russian Federation 075-15-2019-1662Russian Federation budget 0259-2021-0009Russian Foundation for Basic Research 17-29-08028
6 · The paper itself

Abstract

Diseases of cereals caused by pathogenic fungi can significantly reduce crop yields. Many cultures are exposed to them. The disease is difficult to control on a large scale; thus, one of the relevant approaches is the crop field monitoring, which helps to identify the disease at an early stage and take measures to prevent its spread. One of the effective control methods is disease identification based on the analysis of digital images, with the possibility of obtaining them in field conditions, using mobile devices. In this work, we propose a method for the recognition of five fungal diseases of wheat shoots (leaf rust, stem rust, yellow rust, powdery mildew, and septoria), both separately and in case of multiple diseases, with the possibility of identifying the stage of plant development. A set of 2414 images of wheat fungi diseases (WFD2020) was generated, for which expert labeling was performed by the type of disease. More than 80% of the images in the dataset correspond to single disease labels (including seedlings), more than 12% are represented by healthy plants, and 6% of the images labeled are represented by multiple diseases. In the process of creating this set, a method was applied to reduce the degeneracy of the training data based on the image hashing algorithm. The disease-recognition algorithm is based on the convolutional neural network with the EfficientNet architecture. The best accuracy (0.942) was shown by a network with a training strategy based on augmentation and transfer of image styles. The recognition method was implemented as a bot on the Telegram platform, which allows users to assess plants by lesions in the field conditions.

Indexed as

convolutional neural networkdeep learningimage recognitionleaf rustphenotypingpowdery mildewseptoriastem rustwheatyellow rust

Identifiers

PMID34451545
PMCPMC8399806
OpenAlexW3184606750

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.