Evidence map›Paper›PMID 34449827›Full record

ArticlePloS one2021

Phylogeography of Baryancistrus xanthellus (Siluriformes: Loricariidae), a rheophilic catfish endemic to the Xingu River basin in eastern Amazonia.

Keila Xavier Magalhães, Raimundo Darley Figueiredo da Silva, André Oliveira Sawakuchi, Alany Pedrosa Gonçalves, Grazielle Fernanda Evangelista Gomes, Janice Muriel-Cunha, Mark H Sabaj, Leandro Melo de Sousa

Abstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Genetic Structure of the Cave-Dwelling CatfishAnimals : an open access journal from MDPI · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Keila Xavier MagalhãesLaboratório de Ictiologia de Altamira, Universidade Federal do Pará, Altamira, Pará, Brazil.
Raimundo Darley Figueiredo da SilvaLaboratório de Genética Aplicada, Instituto de Estudos Costeiros, Universidade Federal do Pará, Bragança, Pará, Brazil.
André Oliveira SawakuchiInstituto de Geociências, Universidade de São Paulo, São Paulo, São Paulo, Brazil.
Alany Pedrosa GonçalvesInstituto Nacional de Pesquisa da Amazônia, INPA, Programa de Pós-Graduação em Biologia de Água Doce e Pesca Interior, Manaus, Amazonas, Brazil.
Grazielle Fernanda Evangelista GomesLaboratório de Genética Aplicada, Instituto de Estudos Costeiros, Universidade Federal do Pará, Bragança, Pará, Brazil.
Janice Muriel-CunhaInstituto de Estudos Costeiros, Campus Bragança, Universidade Federal do Pará, Bragança, Pará, Brazil.
Mark H SabajDepartment of Ichthyology, The Academy of Natural Sciences of Drexel University, Philadelphia, PA, United States of America.
Leandro Melo de SousaLaboratório de Ictiologia de Altamira, Universidade Federal do Pará, Altamira, Pará, Brazil.ORCID 0000-0002-0793-9737

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Baryancistrus xanthellus (Loricariidae) is an endemic fish species from the Xingu River basin with its life history in the shallow rapid waters flowing over bedrock substrates. In order to investigate the genetic diversity and demographic history of B. xanthellus we analyzed sequence data for one mitochondrial gene (Cyt b) and introns 1 and 5 of nuclear genes Prolactin (Prl) and Ribosomal Protein L3 (RPL3). The analyses contain 358 specimens of B. xanthellus from 39 localities distributed throughout its range. The number of genetically diverged groups was estimated using Bayesian inference on Cyt b haplotypes. Haplotype networks, AMOVA and pairwise fixation index was used to evaluate population structure and gene flow. Historical demography was inferred through neutrality tests and the Extended Bayesian Skyline Plot (EBSP) method. Five longitudinally distributed Cyt b haplogroups for B. xanthellus were identified in the Xingu River and its major tributaries, the Bacajá and Iriri. The demographic analysis suggests that rapids habitats have expanded in the Iriri and Lower Xingu rivers since 200 ka (thousand years) ago. This expansion is possibly related to an increase in water discharge as a consequence of higher rainfall across eastern Amazonia. Conversely, this climate shift also would have promoted zones of sediment trapping and reduction of rocky habitats in the Xingu River channel upstream of the Iriri River mouth. Populations of B. xanthellus showed strong genetic structure along the free-flowing river channels of the Xingu and its major tributaries, the Bacajá and Iriri. The recent impoundment of the Middle Xingu channel for the Belo Monte hydroelectric dam may isolate populations at the downstream limit of the species distribution. Therefore, future conservation plans must consider the genetic diversity of B. xanthellus throughout its range.

Indexed as

PhylogeographyAnimalsBrazilCatfishesGene FlowGenes, MitochondrialGenetic VariationHaplotypesRibosomal Protein L3Ribosomal Protein L3

Identifiers

PMID34449827
PMCPMC8396747

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.