Evidence map›Paper›PMID 34449403›Full record

ArticleJMIR research protocols2021

Detection of Spatiotemporal Clusters of COVID-19-Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study.

David De Ridder, Andrea Jutta Loizeau, José Luis Sandoval, Frédéric Ehrler, Myriam Perrier, Albert Ritch, Guillemette Violot, Marc Santolini, Bastian Greshake Tzovaras, Silvia Stringhini and 4 more

Open access · goldAbstract read
In one paragraph

Article in JMIR research protocols, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

David De Ridder *Division of Primary Care, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0001-6462-2501
Andrea Jutta Loizeau *Division of Primary Care, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0001-6964-2501
José Luis SandovalGroup of Geographic Information Research and Analysis in Population Health, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0002-6256-7083
Frédéric EhrlerDirection of Information Systems, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0001-9734-3242
Myriam PerrierDirection of Information Systems, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0001-9005-4245
Albert RitchDirection of Information Systems, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0003-4296-1400
Guillemette ViolotCommunication Directorate, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0001-9017-1193
Marc SantoliniCenter for Research and Interdisciplinarity, INSERM U1284, University of Paris, Paris, France.ORCID https://orcid.org/0000-0003-1491-0120
Bastian Greshake TzovarasCenter for Research and Interdisciplinarity, INSERM U1284, University of Paris, Paris, France.ORCID https://orcid.org/0000-0002-9925-9623
Silvia StringhiniDivision of Primary Care, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0002-4387-8943
Laurent KaiserDepartment of Health and Community Medicine, Faculty of Medicine, University of Geneva, Geneva, Switzerland.ORCID https://orcid.org/0000-0002-0857-2252
Jean-François PradeauDirection of Information Systems, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0002-0998-817X
Stéphane JoostGroup of Geographic Information Research and Analysis in Population Health, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0002-1184-7501
Idris GuessousDivision of Primary Care, Geneva University Hospitals, Geneva, Switzerland.ORCID https://orcid.org/0000-0002-0491-6089
University of Geneva · CHUniversity Hospital of Geneva · CHInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe early detection of clusters of infectious diseases such as the SARS-CoV-2-related COVID-19 disease can promote timely testing recommendation compliance and help to prevent disease outbreaks. Prior research revealed the potential of COVID-19 participatory syndromic surveillance systems to complement traditional surveillance systems. However, most existing systems did not integrate geographic information at a local scale, which could improve the management of the SARS-CoV-2 pandemic.

objectiveThe aim of this study is to detect active and emerging spatiotemporal clusters of COVID-19-associated symptoms, and to examine (a posteriori) the association between the clusters' characteristics and sociodemographic and environmental determinants.

methodsThis report presents the methodology and development of the @choum (English: "achoo") study, evaluating an epidemiological digital surveillance tool to detect and prevent clusters of individuals (target sample size, N=5000), aged 18 years or above, with COVID-19-associated symptoms living and/or working in the canton of Geneva, Switzerland. The tool is a 5-minute survey integrated into a free and secure mobile app (CoronApp-HUG). Participants are enrolled through a comprehensive communication campaign conducted throughout the 12-month data collection phase. Participants register to the tool by providing electronic informed consent and nonsensitive information (gender, age, geographically masked addresses). Symptomatic participants can then report COVID-19-associated symptoms at their onset (eg, symptoms type, test date) by tapping on the @choum button. Those who have not yet been tested are offered the possibility to be informed on their cluster status (information returned by daily automated clustering analysis). At each participation step, participants are redirected to the official COVID-19 recommendations websites. Geospatial clustering analyses are performed using the modified space-time density-based spatial clustering of applications with noise (MST-DBSCAN) algorithm.

resultsThe study began on September 1, 2020, and will be completed on February 28, 2022. Multiple tests performed at various time points throughout the 5-month preparation phase have helped to improve the tool's user experience and the accuracy of the clustering analyses. A 1-month pilot study performed among 38 pharmacists working in 7 Geneva-based pharmacies confirmed the proper functioning of the tool. Since the tool's launch to the entire population of Geneva on February 11, 2021, data are being collected and clusters are being carefully monitored. The primary study outcomes are expected to be published in mid-2022.

conclusionsThe @choum study evaluates an innovative participatory epidemiological digital surveillance tool to detect and prevent clusters of COVID-19-associated symptoms. @choum collects precise geographic information while protecting the user's privacy by using geomasking methods. By providing an evidence base to inform citizens and local authorities on areas potentially facing a high COVID-19 burden, the tool supports the targeted allocation of public health resources and promotes testing. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): DERR1-10.2196/30444.

Indexed as

COVID-19digital healthdigital surveillanceepidemiologyinfectious diseasemHealthmobile appparticipatory surveillancepublic healthSARS-CoV-2space-time clusteringsurveillance

Identifiers

PMID34449403
PMCPMC8496683
OpenAlexW3185632910

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.