Evidence map›Paper›PMID 34447606›Full record

ArticleJournal of pathology informatics2021

Automated Cervical Digitized Histology Whole-Slide Image Analysis Toolbox.

Sudhir Sornapudi, Ravitej Addanki, R Joe Stanley, William V Stoecker, Rodney Long, Rosemary Zuna, Shellaine R Frazier, Sameer Antani

Abstract read
In one paragraph

Article in Journal of pathology informatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sudhir SornapudiDepartment of Electrical and Computer Engineering, Missouri University of Science and Technology, Rolla, MO, USA.
Ravitej AddankiDepartment of Electrical and Computer Engineering, Missouri University of Science and Technology, Rolla, MO, USA.
R Joe StanleyDepartment of Electrical and Computer Engineering, Missouri University of Science and Technology, Rolla, MO, USA.
William V StoeckerStoecker and Associates, Rolla, MO, USA.
Rodney LongLister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
Rosemary ZunaDepartment of Pathology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Shellaine R FrazierDepartment of Surgical Pathology, University of Missouri Hospitals and Clinics, Columbia, MO, USA.
Sameer AntaniLister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.

Funding

Machine learning and artificial intelligence research for clinical medical image processingZIALM010018 · NLM · NATIONAL LIBRARY OF MEDICINE · PI ANTANI, SAMEER · 2021 to 2025
$9.0M
6 · The paper itself

Abstract

backgroundCervical intraepithelial neoplasia (CIN) is regarded as a potential precancerous state of the uterine cervix. Timely and appropriate early treatment of CIN can help reduce cervical cancer mortality. Accurate estimation of CIN grade correlated with human papillomavirus type, which is the primary cause of the disease, helps determine the patient's risk for developing the disease. Colposcopy is used to select women for biopsy. Expert pathologists examine the biopsied cervical epithelial tissue under a microscope. The examination can take a long time and is prone to error and often results in high inter-and intra-observer variability in outcomes. METHODOLOGY: We propose a novel image analysis toolbox that can automate CIN diagnosis using whole slide image (digitized biopsies) of cervical tissue samples. The toolbox is built as a four-step deep learning model that detects the epithelium regions, segments the detected epithelial portions, analyzes local vertical segment regions, and finally classifies each epithelium block with localized attention. We propose an epithelium detection network in this study and make use of our earlier research on epithelium segmentation and CIN classification to complete the design of the end-to-end CIN diagnosis toolbox.

resultsThe results show that automated epithelium detection and segmentation for CIN classification yields comparable results to manually segmented epithelium CIN classification.

conclusionThis highlights the potential as a tool for automated digitized histology slide image analysis to assist expert pathologists.

Indexed as

Cervical cancercervical intraepithelial neoplasiaclassificationconvolutional neural networksdetectiondigital pathologyhistologysegmentationwhole slide image

Identifiers

PMID34447606
PMCPMC8356709

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.