Evidence map›Paper›PMID 34446720›Full record

ArticleNature communications2021

Neutralization of SARS-CoV-2 variants by convalescent and BNT162b2 vaccinated serum.

Timothy A Bates, Hans C Leier, Zoe L Lyski, Savannah K McBride, Felicity J Coulter, Jules B Weinstein, James R Goodman, Zhengchun Lu, Sarah A R Siegel, Peter Sullivan and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed, 1 pooled it
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 1 synthesis or guideline pooled it, 131 citations in OpenAlex.

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30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 1 country.

Timothy A Bates *Department of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA.ORCID 0000-0002-2533-7668
Hans C Leier *Department of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA.ORCID 0000-0002-0363-1444
Zoe L LyskiDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA.ORCID 0000-0003-3631-8072
Savannah K McBrideDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA.
Felicity J CoulterDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA.ORCID 0000-0003-0485-8752
Jules B WeinsteinDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA.ORCID 0000-0002-2983-3386
James R GoodmanMedical Scientist Training Program, OHSU, Portland, OR, USA.
Zhengchun LuDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA.
Sarah A R SiegelOHSU-PSU School of Public Health, Program in Epidemiology, Portland, OR, USA.ORCID 0000-0001-8249-2632
Peter SullivanOHSU-PSU School of Public Health, Program in Epidemiology, Portland, OR, USA.
Matt StrnadOHSU-PSU School of Public Health, Program in Epidemiology, Portland, OR, USA.
Amanda E BruntonOHSU-PSU School of Public Health, Program in Epidemiology, Portland, OR, USA.
David X LeeDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA.
Andrew C AdeyDepartment of Molecular & Medical Genetics, OHSU, Portland, OR, USA.ORCID 0000-0001-7648-8717
Benjamin N BimberVaccine and Gene Therapy Institute, OHSU, Beaverton, OR, USA.ORCID 0000-0001-8092-3080
Brian J O'RoakDepartment of Molecular & Medical Genetics, OHSU, Portland, OR, USA.
Marcel E CurlinDepartment of Medicine, Division of Infectious Diseases, OHSU, Portland, OR, USA. curlin@ohsu.edu.ORCID 0000-0003-3481-3889
William B MesserDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA. messer@ohsu.edu.ORCID 0000-0002-4381-6347
Fikadu G TafesseDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University (OHSU), Portland, OR, USA. tafesse@ohsu.edu.ORCID 0000-0002-8575-4164
Oregon Health & Science University · USUniversity of Portland · USChildren's Cancer Therapy Development Institute · USOregon Health and Science University Hospital · US

Funding

Long Term Immunity Following Yellow Fever VaccinationR01AI145835 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI MESSER, WILLIAM · 2020 to 2024
$3.2M
NIAID NIH HHS R01 AI145835School of Medicine, Oregon Health and Science University (SOM, OHSU) 1018784U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI145835U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) T32AI747225
6 · The paper itself

Abstract

SARS-CoV-2 and its variants continue to infect hundreds of thousands every day despite the rollout of effective vaccines. Therefore, it is essential to understand the levels of protection that these vaccines provide in the face of emerging variants. Here, we report two demographically balanced cohorts of BNT162b2 vaccine recipients and COVID-19 patients, from which we evaluate neutralizing antibody titers against SARS-CoV-2 as well as the B.1.1.7 (alpha) and B.1.351 (beta) variants. We show that both B.1.1.7 and B.1.351 are less well neutralized by serum from vaccinated individuals, and that B.1.351, but not B.1.1.7, is less well neutralized by convalescent serum. We also find that the levels of variant-specific anti-spike antibodies are proportional to neutralizing activities. Together, our results demonstrate the escape of the emerging SARS-CoV-2 variants from neutralization by serum antibodies, which may lead to reduced protection from re-infection or increased risk of vaccine breakthrough.

Indexed as

AdolescentAdultAgedAged, 80 and overAntibodies, NeutralizingAntibodies, ViralBNT162 VaccineChildChild, PreschoolCohort StudiesCOVID-19COVID-19 VaccinesFemaleHumansInfantMaleAntibodies, NeutralizingAntibodies, ViralBNT162 VaccineCOVID-19 VaccinesSpike Glycoprotein, Coronavirus

Identifiers

PMID34446720
PMCPMC8390486
OpenAlexW3196026921

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.