Evidence map›Paper›PMID 34446564›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Bromodomain containing 9 (BRD9) regulates macrophage inflammatory responses by potentiating glucocorticoid receptor activity.

Liu Wang, Tae Gyu Oh, Jason Magida, Gabriela Estepa, S M Bukola Obayomi, Ling-Wa Chong, Jovylyn Gatchalian, Ruth T Yu, Annette R Atkins, Diana Hargreaves and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 37 citations in OpenAlex.

  1. FXR and BET signaling orchestrate to protect β cells.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Review
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  5. BRD9 at the crossroads of splicing, chromatin remodeling, and hematopoiesis.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2026
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. BRD9 Degradation Disrupts Ribosome Biogenesis in Multiple Myeloma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Liu WangDepartment of Physiology and Biomedical Engineering, Mayo Clinic Arizona, Scottsdale, AZ 85259.ORCID 0000-0001-8252-0170
Tae Gyu OhGene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037.ORCID 0000-0002-2756-3546
Jason MagidaGene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037.ORCID 0000-0002-2241-5368
Gabriela EstepaGene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037.ORCID 0000-0002-8380-1596
S M Bukola ObayomiDepartment of Physiology and Biomedical Engineering, Mayo Clinic Arizona, Scottsdale, AZ 85259.ORCID 0000-0002-2563-5884
Ling-Wa ChongGene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037.ORCID 0000-0002-8571-5413
Jovylyn GatchalianMolecular and Cell Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, 92037.ORCID 0000-0003-0322-4619
Ruth T YuGene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037.ORCID 0000-0002-9527-9627
Annette R AtkinsGene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037.ORCID 0000-0003-3583-4091
Diana HargreavesMolecular and Cell Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, 92037.ORCID 0000-0003-3724-3826
Michael DownesGene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037; wei.zong@mayo.edu downes@salk.edu evans@salk.edu.ORCID 0000-0002-6351-9585
Zong WeiDepartment of Physiology and Biomedical Engineering, Mayo Clinic Arizona, Scottsdale, AZ 85259; wei.zong@mayo.edu downes@salk.edu evans@salk.edu.ORCID 0000-0002-4691-0101
Ronald M EvansGene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037; wei.zong@mayo.edu downes@salk.edu evans@salk.edu.ORCID 0000-0002-9986-5965
Salk Institute for Biological Studies · USMayo Clinic in Arizona · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
Yeast Genetics and Stress Response Genes-BiomedicalP42ES010337 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TUKEY, ROBERT H · 2000 to 2022
$69.8M
Transcriptional GenomicsP01HL088093 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LEY, KLAUS F. · 2008 to 2018
$26.4M
HORMONAL REGULATION OF MAMMALIAN GENE EXPRESSIONR37DK057978 · NIDDK · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI EVANS, RONALD M · 2000 to 2019
$16.0M
Spatial Regulation of Developmental Gene ExpressionR01HL105278 · NHLBI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI EVANS, RONALD M · 2011 to 2019
$4.0M
Engineering human islet-like organoids for transplantationR01DK120480 · NIDDK · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI EVANS, RONALD M · 2018 to 2021
$3.4M
Hormonal Regulation of Mammalian Gene ExpressionR01DK057978 · NIDDK · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI EVANS, RONALD M · 2021 to 2024
$2.6M
Epigenetic regulation of embryonic stem cells by ATP-dependent BAF chromatin remodeling complexesR35GM128943 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI HARGREAVES, DIANA CLARE · 2018 to 2022
$2.5M
A role of chromatin remodeling complexes in beta cell dysfunctionK01DK120808 · NIDDK · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI WEI, ZONG · 2019 to 2021
$421k
NCI NIH HHS P30 CA014195NHLBI NIH HHS P01 HL088093NHLBI NIH HHS R01 HL105278NIDDK NIH HHS K01 DK120808NIDDK NIH HHS R01 DK057978NIDDK NIH HHS R01 DK120480NIDDK NIH HHS R37 DK057978NIEHS NIH HHS P42 ES010337NIGMS NIH HHS R35 GM128943
6 · The paper itself

Abstract

In macrophages, homeostatic and immune signals induce distinct sets of transcriptional responses, defining cellular identity and functional states. The activity of lineage-specific and signal-induced transcription factors are regulated by chromatin accessibility and other epigenetic modulators. Glucocorticoids are potent antiinflammatory drugs; however, the mechanisms by which they selectively attenuate inflammatory genes are not yet understood. Acting through the glucocorticoid receptor (GR), glucocorticoids directly repress inflammatory responses at transcriptional and epigenetic levels in macrophages. A major unanswered question relates to the sequence of events that result in the formation of repressive regions. In this study, we identify bromodomain containing 9 (BRD9), a component of SWI/SNF chromatin remodeling complex, as a modulator of glucocorticoid responses in macrophages. Inhibition, degradation, or genetic depletion of BRD9 in bone marrow-derived macrophages significantly attenuated their responses to both liposaccharides and interferon inflammatory stimuli. Notably, BRD9-regulated genes extensively overlap with those regulated by the synthetic glucocorticoid dexamethasone. Pharmacologic inhibition of BRD9 potentiated the antiinflammatory responses of dexamethasone, while the genetic deletion of BRD9 in macrophages reduced high-fat diet-induced adipose inflammation. Mechanistically, BRD9 colocalized at a subset of GR genomic binding sites, and depletion of BRD9 enhanced GR occupancy primarily at inflammatory-related genes to potentiate GR-induced repression. Collectively, these findings establish BRD9 as a genomic antagonist of GR at inflammatory-related genes in macrophages, and reveal a potential for BRD9 inhibitors to increase the therapeutic efficacies of glucocorticoids.

Indexed as

Chromatin Assembly and DisassemblyGene Expression RegulationAnimalsAnti-Inflammatory AgentsBromodomain Containing ProteinsDexamethasoneMacrophagesMaleMiceMice, Inbred C57BLProtein DomainsReceptors, GlucocorticoidTranscription FactorsAnti-Inflammatory AgentsBrd9 protein, mouseBromodomain Containing ProteinsDexamethasoneReceptors, GlucocorticoidTranscription Factorsbromodomain containing 9 (BRD9)inflammationmacrophages

Identifiers

PMID34446564
PMCPMC8536317
OpenAlexW3193738654

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.