Evidence map›Paper›PMID 34446097›Full record

ArticleBiotechnology for biofuels2021

Accessory enzymes of hypercellulolytic Penicillium funiculosum facilitate complete saccharification of sugarcane bagasse.

Olusola A Ogunyewo, Pooja Upadhyay, Girish H Rajacharya, Omoaruemike E Okereke, Laura Faas, Leonardo D Gómez, Simon J McQueen-Mason, Syed Shams Yazdani

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Profiling of the β-glucosidases identified in the genome ofApplied and environmental microbiology · 2023
    Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Olusola A OgunyewoMicrobial Engineering Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
Pooja UpadhyayMicrobial Engineering Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
Girish H RajacharyaMicrobial Engineering Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
Omoaruemike E OkerekeMicrobial Engineering Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
Laura FaasDepartment of Biology, Centre for Novel Agricultural Products, CNAP, University of York, York, YO10 5DD, UK.
Leonardo D GómezDepartment of Biology, Centre for Novel Agricultural Products, CNAP, University of York, York, YO10 5DD, UK.
Simon J McQueen-MasonDepartment of Biology, Centre for Novel Agricultural Products, CNAP, University of York, York, YO10 5DD, UK.
Syed Shams YazdaniMicrobial Engineering Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India. shams@icgeb.res.in.ORCID http://orcid.org/0000-0002-6558-4612
University of York · GBCentre for Advanced Bioenergy Research · INInternational Centre for Genetic Engineering and Biotechnology · INInternational Centre for Genetic Engineering and Biotechnology · ZA

Funding

Biotechnology and Biological Sciences Research Council TS/R017034/1Department of Biotechnology, Ministry of Science and Technology BT/IN/Indo‑UK/SSY/07/2018-19Department of Biotechnology, Ministry of Science and Technology BT/PR/Centre/03/2011-Phase II
6 · The paper itself

Abstract

backgroundSugarcane bagasse (SCB) is an abundant feedstock for second-generation bioethanol production. This complex biomass requires an array of carbohydrate active enzymes (CAZymes), mostly from filamentous fungi, for its deconstruction to monomeric sugars for the production of value-added fuels and chemicals. In this study, we evaluated the repertoire of proteins in the secretome of a catabolite repressor-deficient strain of Penicillium funiculosum, PfMig1

resultsA systematic approach was developed for the cultivation of the fungus with the aim of producing and understanding arrays of enzymes tailored for saccharification of SCB. To achieve this, the fungus was grown in media supplemented with different concentrations of pretreated SCB (0-45 g/L). The profile of secreted proteins was characterized by enzyme activity assays and liquid chromatography-tandem mass spectrometry (LC-MS/MS). A total of 280 proteins were identified in the secretome of PfMig1

conclusionOur findings provide an insight into the enzyme system of PfMig1

Indexed as

Biomass saccharificationCAZymesEngineered PfMig188ProteomicsQuantitative mass spectrometrySugarcane bagasse

Identifiers

PMID34446097
PMCPMC8394629
OpenAlexW3193996278

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.