Evidence map›Paper›PMID 34445951›Full record

ArticleBMC microbiology2021

Emerging MDR-Mycobacterium avium subsp. avium in house-reared domestic birds as the first report in Egypt.

Abdelazeem M Algammal, Hany R Hashem, Amenah S Al-Otaibi, Khyreyah J Alfifi, Esraa M El-Dawody, Eman Mahrous, Helal F Hetta, Ali W El-Kholy, Hazem Ramadan, Reham M El-Tarabili

Abstract read
In one paragraph

Article in BMC microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Review
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  6. Isolation of Multidrug-ResistantAntibiotics (Basel, Switzerland) · 2024
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  7. Gallibacterium anatis infection in poultry: a comprehensive review.Tropical animal health and production · 2023
    Review
  8. Review
  9. Article
  10. Review
  11. Infection and drug resistance · 2023
    Article
  12. Article
  13. Identification and Phylogenetic Analysis ofTransboundary and emerging diseases · 2023
    Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Abdelazeem M AlgammalDepartment of Bacteriology, Immunology and Mycology, Faculty of Veterinary Medicine, Suez Canal University, Ismailia, 41522, Egypt. abdelazeem.algammal@vet.suez.edu.eg.
Hany R HashemDepartment of Microbiology and Immunology, Faculty of Pharmacy, Fayoum University, Fayoum, 63514, Egypt.
Amenah S Al-OtaibiBiology Department, College of Sciences, Tabuk University, Tabuk, 71491, Saudi Arabia.
Khyreyah J AlfifiBiology Department, College of Sciences, Tabuk University, Tabuk, 71491, Saudi Arabia.
Esraa M El-DawodyAnimal Health Research Institute, Dokki, Giza, 12618, Egypt.
Eman MahrousAnimal Health Research Institute, Dokki, Giza, 12618, Egypt.
Helal F HettaDepartment of Medical Microbiology and Immunology, Faculty of Medicine, Assuit University, Assuit, 71515, Egypt.
Ali W El-KholyDepartment of Bacteriology, Immunology and Mycology, Faculty of Veterinary Medicine, Suez Canal University, Ismailia, 41522, Egypt.
Hazem RamadanHygiene and Zoonoses Department, Faculty of Veterinary Medicine, Mansoura University, Mansoura, 35516, Egypt.
Reham M El-TarabiliDepartment of Bacteriology, Immunology and Mycology, Faculty of Veterinary Medicine, Suez Canal University, Ismailia, 41522, Egypt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAvian tuberculosis is a chronic and zoonotic disease that affects a wide variety of birds, mammals, and humans. This study aimed to estimate the frequency of Mycobacterium avium subsp. avium in some domestic birds based on molecular diagnosis, antibiogram profile, and PCR-based detection of inhA, rpoB, rpsL, and otrB antibiotic resistance-related genes.

methodsA total of 120 fecal samples were collected from small flocks of house-reared domestic birds at Ismailia Governorate, Egypt. The collected samples were processed and subjected to the bacteriological examination. The antimicrobial susceptibility testing of the recovered isolates was performed using the broth microdilution method for the detection of minimum inhibitory concentrations (MICs). The genetic detection of the IS901confirmatory gene, inhA, rpoB, rpsL, and otrB genes was carried out using PCR.

resultsThe frequency of M. avium subsp. avium was 4.1% (5/120); 10% (4/40) in ducks, and 2.5% (1/10) in geese. The identification of the recovered isolates was confirmed using PCR, where all the tested isolates were positive for IS901confirmatory gene. The results of the broth microdilution method revealed that most of the recovered isolates exhibited multidrug resistance (MDR) to isoniazid, rifampicin, streptomycin, oxytetracycline, and doxycycline, and harbored the inhA, rpoB, rpsL, and otrB genes.

conclusionIn brief, to the best of our knowledge this is the first report that emphasized the emergence of avian tuberculosis in house-reared domestic birds in Egypt. The emergence of MDR- M. avium subsp. avium is considered a public health threat. Emerging MDR-M. avium subsp. avium in domestic birds are commonly harbored the IS901, inhA, rpoB, rpsL, and otrB genes. Azithromycin and clofazimine revealed a promising in-vitro antibacterial activity against M. avium subsp. avium.

Indexed as

Drug Resistance, Multiple, BacterialAnimalsAnti-Bacterial AgentsBacterial ZoonosesBirdsDucksEgyptFecesGeeseMicrobial Sensitivity TestsMycobacteriumMycobacterium InfectionsPetsAnti-Bacterial AgentsAntibiogramHouse-reared domestic birds, prevalenceM. avium subsp. aviumMDR, antibiotic resistance-related genes

Identifiers

PMID34445951
PMCPMC8393820

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.