Evidence map›Paper›PMID 34443369›Full record

ArticleMolecules (Basel, Switzerland)2021

A Horizontal Magnetic Tweezers for Studying Single DNA Molecules and DNA-Binding Proteins.

Roberto Fabian, Santosh Gaire, Christopher Tyson, Raghabendra Adhikari, Ian Pegg, Abhijit Sarkar

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Mechanical Constraint Effect on DNA Persistence Length.Molecules (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Roberto FabianDepartment of Physics and Vitreous State Laboratory, The Catholic University of America, Washington, DC 20064, USA.
Santosh GaireDepartment of Physics and Vitreous State Laboratory, The Catholic University of America, Washington, DC 20064, USA.
Christopher TysonBiomedical Engineering Department and Vitreous State Laboratory, The Catholic University of America, Washington, DC 20064, USA.
Raghabendra AdhikariDepartment of Biology, The Catholic University of America, Washington, DC 20064, USA.
Ian PeggDepartment of Physics and Vitreous State Laboratory, The Catholic University of America, Washington, DC 20064, USA.
Abhijit SarkarDepartment of Physics and Vitreous State Laboratory, The Catholic University of America, Washington, DC 20064, USA.
Catholic University of America · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report data from single molecule studies on the interaction between single DNA molecules and core histones using custom-designed horizontal magnetic tweezers. The DNA-core histone complexes were formed using λ-DNA tethers, core histones, and NAP1 and were exposed to forces ranging from ~2 pN to ~74 pN. During the assembly events, we observed the length of the DNA decrease in approximate integer multiples of ~50 nm, suggesting the binding of the histone octamers to the DNA tether. During the mechanically induced disassembly events, we observed disruption lengths in approximate integer multiples of ~50 nm, suggesting the unbinding of one or more octamers from the DNA tether. We also observed histone octamer unbinding events at forces as low as ~2 pN. Our horizontal magnetic tweezers yielded high-resolution, low-noise data on force-mediated DNA-core histone assembly and disassembly processes.

Indexed as

Magnetic PhenomenaBiomechanical PhenomenaDNADNA-Binding ProteinsHistonesProtein BindingDNADNA-Binding ProteinsHistonesDNA-histone interactionshorizontal magnetic tweezersnucleosomessingle molecule micromanipulation techniques

Identifiers

PMID34443369
PMCPMC8398817
OpenAlexW3187558932

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.