Evidence map›Paper›PMID 34442799›Full record

ArticleMicroorganisms2021

Cross-Shore and Depth Zonations in Bacterial Diversity Are Linked to Age and Source of Dissolved Organic Matter across the Intertidal Area of a Sandy Beach.

Julius Degenhardt, Julian Merder, Benedikt Heyerhoff, Heike Simon, Bert Engelen, Hannelore Waska

Abstract read
In one paragraph

Article in Microorganisms, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Julius DegenhardtInstitute for Chemistry and Biology of the Marine Environment, University of Oldenburg, 26111 Oldenburg, Germany.
Julian MerderDepartment of Global Ecology, Carnegie Institution for Science, Stanford, CA 94305, USA.ORCID 0000-0002-5958-7016
Benedikt HeyerhoffInstitute for Chemistry and Biology of the Marine Environment, University of Oldenburg, 26111 Oldenburg, Germany.ORCID 0000-0001-5068-5843
Heike SimonInstitute for Chemistry and Biology of the Marine Environment, University of Oldenburg, 26111 Oldenburg, Germany.
Bert EngelenInstitute for Chemistry and Biology of the Marine Environment, University of Oldenburg, 26111 Oldenburg, Germany.ORCID 0000-0002-8117-0460
Hannelore WaskaInstitute for Chemistry and Biology of the Marine Environment, University of Oldenburg, 26111 Oldenburg, Germany.ORCID 0000-0002-5761-560X

Funding

Niedersächsisches Ministerium für Wissenschaft und Kultur ZN3184
6 · The paper itself

Abstract

Microbial communities and dissolved organic matter (DOM) are intrinsically linked within the global carbon cycle. Demonstrating this link on a molecular level is hampered by the complexity of both counterparts. We have now investigated this connection within intertidal beach sediments, characterized by a runnel-ridge system and subterranean groundwater discharge. Using datasets generated by Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) and Ilumina-sequencing of 16S rRNA genes, we predicted metabolic functions and determined links between bacterial communities and DOM composition. Four bacterial clusters were defined, reflecting differences within the community compositions. Those were attributed to distinct areas, depths, or metabolic niches. Cluster I was found throughout all surface sediments, probably involved in algal-polymer degradation. In ridge and low water line samples, cluster III became prominent. Associated porewaters indicated an influence of terrestrial DOM and the release of aromatic compounds from reactive iron oxides. Cluster IV showed the highest seasonality and was associated with species previously reported from a subsurface bloom. Interestingly, Cluster II harbored several members of the candidate phyla radiation (CPR) and was related to highly degraded DOM. This may be one of the first geochemical proofs for the role of candidate phyla in the degradation of highly refractory DOM.

Indexed as

dissolved organic matterDOMfunctional diversityintertidal areamicrobial diversityNorth Seasandy beachSGD

Identifiers

PMID34442799
PMCPMC8399146

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.