Evidence map›Paper›PMID 34440578›Full record

ArticleLife (Basel, Switzerland)2021

Transcriptomic Analysis of Long Noncoding RNA and mRNA Expression Profiles in the Amygdala of Rats with Bone Cancer Pain-Depression Comorbidity.

Shuyan Wu, Xiaohui Chen, Fengyi Huang, Mingxue Lin, Pinzhong Chen, Haiyang Wan, Fei Gao, Ting Zheng, Xiaochun Zheng

Open access · goldAbstract read
In one paragraph

Article in Life (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Shuyan WuDepartment of Anesthesiology, Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, China.
Xiaohui ChenDepartment of Anesthesiology, Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, China.
Fengyi HuangDepartment of Anesthesiology, Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, China.
Mingxue LinDepartment of Anesthesiology, Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, China.
Pinzhong ChenDepartment of Anesthesiology, Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, China.
Haiyang WanDepartment of Anesthesiology, Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, China.
Fei GaoDepartment of Anesthesiology, Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, China.
Ting ZhengDepartment of Anesthesiology, Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, China.
Xiaochun ZhengDepartment of Anesthesiology, Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, China.ORCID 0000-0002-6213-0789
Fujian Medical University · CN

Funding

he Medical Innovation Project of Fujian province 2020CXB002National Natural Science Foundation of China 82001166the Joint Funds for the Innovation of Science and Technology, Fujian Province 2019Y9023the Joint Funds for the Innovation of Science and Technology, Fujian Province 2019Y9028
6 · The paper itself

Abstract

Bone cancer pain (BCP)-depression comorbidity has become a complex clinical problem during cancer treatment; however, its underlying molecular mechanisms have not been clarified. Several long noncoding RNAs (lncRNAs) have been demonstrated to be promising therapeutic targets in depression, but research on the role of lncRNAs in BCP-depression comorbidity has been limited. Therefore, high-throughput RNA sequencing was performed to detect differentially expressed profiles in the amygdala of a BCP-depression rat model in this study. We detected 330 differentially expressed mRNAs (DEmRNAs) and 78 differentially expressed lncRNAs (DElncRNAs) in the BCP-depression comorbidity model and then verified the expression of six DEmRNAs and six DElncRNAs with the greatest degrees of difference by RT-qPCR. Furthermore, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses revealed that differentially expressed genes were strongly enriched in inflammatory and immunologic systemic responses. Then the nuclear factor kappa B (NF-κB) signaling pathway and the Th17 differentiation pathway showed significant differences, as determined by Western blot analysis. Finally, we constructed a protein-protein interaction (PPI) network to explore the potential regulatory mechanism of DEmRNAs. In conclusion, our study reveals a new resource for the understanding of dysregulated lncRNAs and mRNAs in BCP-depression comorbidity and provides novel potential therapeutic targets for further approaches.

Indexed as

bone cancer paindepressionhigh-throughput RNA sequencingimmune responseinflammation

Identifiers

PMID34440578
PMCPMC8400935
OpenAlexW3194710229

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.