Evidence map›Paper›PMID 34437148›Full record

ArticleScience (New York, N.Y.)2021

Chromatin landscape signals differentially dictate the activities of mSWI/SNF family complexes.

Nazar Mashtalir, Hai T Dao, Akshay Sankar, Hengyuan Liu, Aaron J Corin, John D Bagert, Eva J Ge, Andrew R D'Avino, Martin Filipovski, Brittany C Michel and 3 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. SMARCD1 and Its Functional Relevance in SWI/SNF and Cancer.International journal of molecular sciences · 2026
    Review
  5. Article
  6. Article
  7. The SMARCA4-TMEM47 axis plays an essential role in chikungunya virus RNA replication.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Nazar Mashtalir *Department of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-6624-4839
Hai T Dao *Department of Chemistry, Princeton University, Princeton, NJ, USA.ORCID 0000-0003-0581-1489
Akshay SankarDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Hengyuan LiuDepartment of Chemistry, Princeton University, Princeton, NJ, USA.ORCID 0000-0003-1540-7295
Aaron J CorinDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
John D BagertDepartment of Chemistry, Princeton University, Princeton, NJ, USA.ORCID 0000-0001-7768-2853
Eva J GeDepartment of Chemistry, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-9238-1466
Andrew R D'AvinoDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-8962-5175
Martin FilipovskiDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-4227-4267
Brittany C MichelDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Geoffrey P DannDepartment of Chemistry, Princeton University, Princeton, NJ, USA.
Tom W MuirDepartment of Chemistry, Princeton University, Princeton, NJ, USA. muir@princeton.edu cigall_kadoch@dfci.harvard.edu.ORCID 0000-0001-9635-0344
Cigall KadochDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA. muir@princeton.edu cigall_kadoch@dfci.harvard.edu.ORCID 0000-0002-4058-5985

Funding

Shared Resources Core 2: Quantitative Proteomics CoreP01CA196539 · NCI · ROCKEFELLER UNIVERSITY · PI GARCIA, BENJAMIN A · 2015 to 2024
$17.6M
Structure, Function and Applications of InteinsR37GM086868 · NIGMS · PRINCETON UNIVERSITY · PI MUIR, TOM · 2012 to 2021
$5.4M
Structure-activity relationships governing mammalian SWI/SNF chromatin remodeling activity as a function of chromatin stateR01CA259365 · NCI · DANA-FARBER CANCER INST · PI Cigall Kadoch, Tom Muir · 2021 to 2026
$4.2M
Reversing Oncogenic BAF Complex Structure & Function: New Therapeutic ApproachesDP2CA195762 · NCI · DANA-FARBER CANCER INST · PI KADOCH, CIGALL · 2014 to 2014
$2.6M
Structure and Function of ATP-Dependent Chromatin Remodeling Complexes in Human CancerK99CA237855 · NCI · DANA-FARBER CANCER INST · PI MASHTALIR, NAZAR · 2019 to 2020
$278k
Exploring second-tier post-translational modifications in chromatin biology: A new class of histone modifications with undetermined functionF32GM123659 · NIGMS · PRINCETON UNIVERSITY · PI BAGERT, JOHN DAVID · 2017 to 2018
$118k
NCI NIH HHS DP2 CA195762NCI NIH HHS K99 CA237855NCI NIH HHS P01 CA196539NCI NIH HHS R01 CA259365NIGMS NIH HHS F32 GM123659NIGMS NIH HHS R37 GM086868
6 · The paper itself

Abstract

Mammalian SWI/SNF (mSWI/SNF) adenosine triphosphate-dependent chromatin remodelers modulate genomic architecture and gene expression and are frequently mutated in disease. However, the specific chromatin features that govern their nucleosome binding and remodeling activities remain unknown. We subjected endogenously purified mSWI/SNF complexes and their constituent assembly modules to a diverse library of DNA-barcoded mononucleosomes, performing more than 25,000 binding and remodeling measurements. Here, we define histone modification-, variant-, and mutation-specific effects, alone and in combination, on mSWI/SNF activities and chromatin interactions. Further, we identify the combinatorial contributions of complex module components, reader domains, and nucleosome engagement properties to the localization of complexes to selectively permissive chromatin states. These findings uncover principles that shape the genomic binding and activity of a major chromatin remodeler complex family.

Indexed as

Chromatin Assembly and DisassemblyAdenosine TriphosphatasesAdenosine TriphosphateChromatinChromosomal Proteins, Non-HistoneHistone CodeHistonesHumansModels, MolecularMultiprotein ComplexesMutationNucleosomesProtein BindingProtein DomainsProtein SubunitsTranscription FactorsAdenosine TriphosphatasesAdenosine TriphosphateChromatinChromosomal Proteins, Non-HistoneHistonesMultiprotein ComplexesNucleosomesProtein SubunitsSWI-SNF-B chromatin-remodeling complexTranscription Factors

Identifiers

PMID34437148
PMCPMC8390793

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.