Evidence map›Paper›PMID 34436504›Full record

ArticleMetabolites2021

PRM-MS Quantitative Analysis of Isomeric

Cristian D Gutierrez Reyes, Yifan Huang, Mojgan Atashi, Jie Zhang, Jianhui Zhu, Suyu Liu, Neehar D Parikh, Amit G Singal, Jianliang Dai, David M Lubman and 1 more

Open access · goldAbstract read
In one paragraph

Article in Metabolites, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
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  9. Article
  10. Multi Omics Applications in Biological Systems.Current issues in molecular biology · 2024
    Review
  11. Article
  12. The role ofActa pharmaceutica Sinica. B · 2024
    Review
  13. Targeted Glycoproteomics Analysis Using MRM/PRM Approaches.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  14. Article
  15. Variations inBiomolecules · 2023
    Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Cristian D Gutierrez ReyesDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX 79409, USA.ORCID 0000-0001-5229-4723
Yifan HuangDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX 79409, USA.
Mojgan AtashiDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX 79409, USA.
Jie ZhangDepartment of Surgery, The University of Michigan, Ann Arbor, MI 48109, USA.
Jianhui ZhuDepartment of Surgery, The University of Michigan, Ann Arbor, MI 48109, USA.
Suyu LiuDepartment of Biostatistics, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Neehar D ParikhDivision of Gastroenterology and Hepatology, The University of Michigan, Ann Arbor, MI 48109, USA.
Amit G SingalDivision of Digestive and Liver Diseases, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Jianliang DaiDepartment of Biostatistics, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
David M LubmanDepartment of Surgery, The University of Michigan, Ann Arbor, MI 48109, USA.
Yehia MechrefDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX 79409, USA.
Texas Tech University · USUniversity of Michigan · USThe University of Texas MD Anderson Cancer Center · USThe University of Texas Southwestern Medical Center · US

Funding

Supplemental for Detection of Glycopeptides of MCI in Patient SerumR01CA160254 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI David M. Lubman · 2012 to 2026
$5.4M
Precision Risk Stratification and Screening for HCC among Patients with Cirrhosis in the United StatesU01CA230694 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI SINGAL, AMIT · 2018 to 2022
$3.5M
Sensitive and Quantitative MS-bases Glycomic Mapping PlatformR01GM112490 · NIGMS · TEXAS TECH UNIVERSITY · PI MECHREF, YEHIA · 2014 to 2024
$3.2M
Quantitative Characterization of Glycopeptide IsomersR01GM130091 · NIGMS · TEXAS TECH UNIVERSITY · PI Yehia Mechref · 2019 to 2026
$2.5M
Screening of Glycan Markers in Serum for Early Detection of HCC in Different Etiologies of DiseaseU01CA225753 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LUBMAN, DAVID M., MECHREF, YEHIA · 2018 to 2021
$2.0M
Discovery and Validation of Biomarkers for Early Cancer Detection Using Mass SpectrometryR50CA221808 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ZHU, JIANHUI · 2018 to 2020
$189k
NCI NIH HHS R01 CA160254NCI NIH HHS R50 CA221808NCI NIH HHS U01 CA225753NCI NIH HHS U01 CA230694NIGMS NIH HHS R01 GM112490NIGMS NIH HHS R01 GM130091NIH HHS 1R01CA160254NIH HHS 1R01GM112490-07NIH HHS 1R01GM130091-02NIH HHS 1U01CA225753-01NIH HHS R50CA221808NIH HHS U01CA230694
6 · The paper itself

Abstract

Currently, surveillance strategies have inadequate performance for cirrhosis and early detection of hepatocellular carcinoma (HCC). The glycosylation of serum haptoglobin has shown to have significant differences between cirrhosis and HCC, thus can be used for diagnosis. We performed a comprehensive liquid chromatography-parallel reaction monitoring-mass spectrometry (LC-PRM-MS) approach, where a targeted parallel reaction monitoring (PRM) strategy was coupled to a powerful LC system, to study the site-specific isomerism of haptoglobin (Hp) extracted from cirrhosis and HCC patients. We found that our strategy was able to identify a large number of isomeric

Indexed as

cirrhosishaptoglobinhepatocellular carcinoma (HCC)N-glycopeptidesPRM

Identifiers

PMID34436504
PMCPMC8400780
OpenAlexW3157934682

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.