Evidence map›Paper›PMID 34436126›Full record

ArticleJournal of fungi (Basel, Switzerland)2021

Soil Mycobiome Is Shaped by Vegetation and Microhabitats: A Regional-Scale Study in Southeastern Brazil.

Danielle Hamae Yamauchi, Hans Garcia Garces, Marcus de Melo Teixeira, Gabriel Fellipe Barros Rodrigues, Leila Sabrina Ullmann, Adalberto Garcia Garces, Flavia Hebeler-Barbosa, Eduardo Bagagli

Abstract read
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Danielle Hamae YamauchiDepartment of Chemical and Biological Sciences, Institute of Biosciences, São Paulo State University 'Júlio de Mesquita Filho', Botucatu 18618-689, SP, Brazil.ORCID 0000-0003-2687-5836
Hans Garcia GarcesDepartment of Chemical and Biological Sciences, Institute of Biosciences, São Paulo State University 'Júlio de Mesquita Filho', Botucatu 18618-689, SP, Brazil.ORCID 0000-0002-6100-3534
Marcus de Melo TeixeiraCenter for Tropical Medicine, Faculty of Medicine, University of Brasília (UnB), Brasília 70910-900, DF, Brazil.ORCID 0000-0003-1763-3464
Gabriel Fellipe Barros RodriguesDepartment of Biostatistics, Plant Biology, Parasitology and Zoology, Institute of Biosciences, São Paulo State University 'Júlio de Mesquita Filho', Botucatu 18618-689, SP, Brazil.ORCID 0000-0002-1679-9270
Leila Sabrina UllmannInstitute for Biotechnology, São Paulo State University 'Júlio de Mesquita Filho', Botucatu 18607-440, SP, Brazil.
Adalberto Garcia GarcesDepartment of Chemical and Biological Sciences, Institute of Biosciences, São Paulo State University 'Júlio de Mesquita Filho', Botucatu 18618-689, SP, Brazil.ORCID 0000-0002-7501-3362
Flavia Hebeler-BarbosaLaboratory of Molecular Biology, Medical School, São Paulo State University 'Júlio de Mesquita Filho', Botucatu 18618-687, SP, Brazil.
Eduardo BagagliDepartment of Chemical and Biological Sciences, Institute of Biosciences, São Paulo State University 'Júlio de Mesquita Filho', Botucatu 18618-689, SP, Brazil.ORCID 0000-0002-8003-4109

Funding

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 88882.183597 / 2018-01Fundação de Amparo à Pesquisa do Estado de São Paulo Process 2018 / 06390-9
6 · The paper itself

Abstract

Soil is the principal habitat and reservoir of fungi that act on ecological processes vital for life on Earth. Understanding soil fungal community structures and the patterns of species distribution is crucial, considering climatic change and the increasing anthropic impacts affecting nature. We evaluated the soil fungal diversity in southeastern Brazil, in a transitional region that harbors patches of distinct biomes and ecoregions. The samples originated from eight habitats, namely: semi-deciduous forest, Brazilian savanna, pasture, coffee and sugarcane plantation, abandoned buildings, owls' and armadillos' burrows. Forty-four soil samples collected in two periods were evaluated by metagenomic approaches, focusing on the high-throughput DNA sequencing of the ITS2 rDNA region in the Illumina platform. Normalized difference vegetation index (NDVI) was used for vegetation cover analysis. NDVI values showed a linear relationship with both diversity and richness, reinforcing the importance of a healthy vegetation for the establishment of a diverse and complex fungal community. The owls' burrows presented a peculiar fungal composition, including high rates of Onygenales, commonly associated with keratinous animal wastes, and Trichosporonales, a group of basidiomycetous yeasts. Levels of organic matter and copper influenced all guild communities analyzed, supporting them as important drivers in shaping the fungal communities' structures.

Indexed as

fungal communitiesNDVIsoil mycobiome

Identifiers

PMID34436126
PMCPMC8396882

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.