Evidence map›Paper›PMID 34434204›Full record

ArticleFrontiers in plant science2021

Integrated Bayesian Approaches Shed Light on the Dissemination Routes of the Eurasian Grapevine Germplasm.

Francesco Mercati, Gabriella De Lorenzis, Antonio Mauceri, Marcello Zerbo, Lucio Brancadoro, Claudio D'Onofrio, Caterina Morcia, Maria Gabriella Barbagallo, Cristina Bignami, Massimo Gardiman and 5 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Adaptive and maladaptive introgression in grapevine domestication.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. A high-density integrated map for grapevine based on three mapping populations genotyped by the Vitis18K SNP chip.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  6. Elucidating the Genetic Relationships on the Original Old SicilianInternational journal of molecular sciences · 2022
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Francesco MercatiIstituto Bioscienze e Biorisorse, Consiglio Nazionale delle Ricerche, Palermo, Italy.
Gabriella De LorenzisDipartimento di Scienze Agrarie ed Ambientali, Università degli Studi di Milan, Milan, Italy.
Antonio MauceriDipartimento Agraria, Università Mediterranea degli Studi di Reggio Calabria, Reggio Calabria, Italy.
Marcello ZerboIstituto Bioscienze e Biorisorse, Consiglio Nazionale delle Ricerche, Palermo, Italy.
Lucio BrancadoroDipartimento di Scienze Agrarie ed Ambientali, Università degli Studi di Milan, Milan, Italy.
Claudio D'OnofrioDipartimento di Scienze Agrarie, Alimentari e Agro-ambientali, Università degli Studi di Pisa, Pisa, Italy.
Caterina MorciaCREA - Centro di Ricerca per la Genomica e la Bioinformatica, Fiorenzuola d'Arda, Italy.
Maria Gabriella BarbagalloDipartimento di Scienze Agrarie e Forestali, Università degli Studi di Palermo, Palermo, Italy.
Cristina BignamiDipartimento di Scienze della Vita, Centro Biogest-Siteia, Università degli Studi di Modena e Reggio Emilia, Reggio Emilia, Italy.
Massimo GardimanCREA - Centro di Ricerca per la Viticoltura ed Enologia, Conegliano, Italy.
Laura de PalmaDipartimento di Scienze Agrarie, Alimenti, Risorse Naturali e Ingegneria, Università degli Studi di Foggia, Foggia, Italy.
Paola RuffaIstituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Torino, Italy.
Vittorino NovelloDipartimento di Scienze Agrarie, Forestali e Alimentari, Università degli Studi di Torino, Grugliasco, Italy.
Manna CrespanCREA - Centro di Ricerca per la Viticoltura ed Enologia, Conegliano, Italy.
Francesco SunseriDipartimento Agraria, Università Mediterranea degli Studi di Reggio Calabria, Reggio Calabria, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The domestication and spreading of grapevine as well as the gene flow history had been described in many studies. We used a high-quality 7k SNP dataset of 1,038 Eurasian grape varieties with unique profiles to assess the population genetic diversity, structure, and relatedness, and to infer the most likely migration events. Comparisons of putative scenarios of gene flow throughout Europe from Caucasus helped to fit the more reliable migration routes around the Mediterranean Basin. Approximate Bayesian computation (ABC) approach made possible to provide a response to several questions so far remaining unsolved. Firstly, the assessment of genetic diversity and population structure within a well-covered dataset of ancient Italian varieties suggested the different histories between the Northern and Southern Italian grapevines. Moreover, Italian genotypes were shown to be distinguishable from all the other Eurasian populations for the first time. The entire Eurasian panel confirmed the east-to-west gene flow, highlighting the Greek role as a "bridge" between the Western and Eastern Eurasia. Portuguese germplasm showed a greater proximity to French varieties than the Spanish ones, thus being the main route for gene flow from Iberian Peninsula to Central Europe. Our findings reconciled genetic and archaeological data for one of the most cultivated and fascinating crops in the world.

Indexed as

ancestry coefficientsgenetic structureLD decaymigration eventsSNP arrayVitis vinifera L. subsp. sativa

Identifiers

PMID34434204
PMCPMC8381769

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.