Evidence map›Paper›PMID 34433470›Full record

ArticleBMC veterinary research2021

Development and evaluation of recombinase polymerase amplification combined with lateral flow dipstick assays for co-detection of epizootic haemorrhagic disease virus and the Palyam serogroup virus.

Zhuo-Ran Li, Zhen-Xing Yang, Zhan-Hong Li, Xiang Gao, Zhong-Yan Hu, Heng Yang, De-Fang Liao

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zhuo-Ran LiYunnan Tropical and Subtropical Animal Virus Diseases Laboratory, Yunnan Animal Science and Veterinary Institute, Yunnan, 650224, Kunming, China.
Zhen-Xing YangYunnan Tropical and Subtropical Animal Virus Diseases Laboratory, Yunnan Animal Science and Veterinary Institute, Yunnan, 650224, Kunming, China.
Zhan-Hong LiYunnan Tropical and Subtropical Animal Virus Diseases Laboratory, Yunnan Animal Science and Veterinary Institute, Yunnan, 650224, Kunming, China.
Xiang GaoAnimal Disease Control and Prevention Center of Jinghong, Yunnan, 666100, Jinghong, China.
Zhong-Yan HuAnimal Disease Control and Prevention Center of Jinghong, Yunnan, 666100, Jinghong, China.
Heng YangYunnan Tropical and Subtropical Animal Virus Diseases Laboratory, Yunnan Animal Science and Veterinary Institute, Yunnan, 650224, Kunming, China. yangheng2008.cool@163.com.
De-Fang LiaoYunnan Tropical and Subtropical Animal Virus Diseases Laboratory, Yunnan Animal Science and Veterinary Institute, Yunnan, 650224, Kunming, China. 641975232@qq.com.
Yunnan Animal Science and Veterinary Institute · CNChina Animal Disease Control Center · CN

Funding

Applied Basic Research Program of Yunnan Province 2019FB041National Key R&D Program of China 2017YFC1200500National Natural Science Foundation of China 31760744National Natural Science Foundation of China 31802177
6 · The paper itself

Abstract

backgroundEpizootic haemorrhagic disease virus (EHDV) and the Palyam serogroup viruses (PALV) have led to significant economic losses associated with livestock production globally. A rapid, sensitive and specific method for the detection of EHDV and PALV is critical for virus detection, monitoring, and successful control and elimination of related diseases.

resultsIn the present study, a recombinase polymerase amplification combined with lateral flow dipstick (RPA-LFD) assay for the co-detection of genome segment 1 (Seg-1) of EHDV and PALV was developed and evaluated. The analytical sensitivities of the established RPA-LFD assay in the detection of EHDV and PALV were 7.1 copies/µL and 6.8 copies/µL, respectively. No cross-reaction with other members of the genus Orbivirus, including African horse sickness virus, bluetongue virus, Guangxi orbivirus, Tibet orbivirus and Yunnan orbivirus was observed. The established RPA-LFD assay accurately detected 39 EHDV strains belonging to 5 serotypes and 29 PALV strains belonging to 3 serotypes. The trace back results of quantitative real-time polymerase chain reaction (qRT-PCR) and the established RPA-LFD assay on sentinel cattle were consistent. The coincidence rates of qRT-PCR and the established RPA-LFD assay in 56 blood samples from which EHDV or PALV had been isolated and 96 blood samples collected from cattle farms were more than 94.8 %. The results demonstrated that the established RPR-LFD assay is specific, sensitive and reliable, and could be applied in early clinical diagnosis of EHDV and PALV.

conclusionsThis study highlights the development and application of the RPA-LFD assay in the co-detection of EHDV and PALV for the first time. The assay could be used as a potential optional rapid, reliable, sensitive and low-cost method for field diagnosis of EHDV and PALV.

Indexed as

AnimalsBiological AssayCattleHemorrhagic Disease Virus, EpizooticNucleic Acid Amplification TechniquesPalyam VirusReal-Time Polymerase Chain ReactionRecombinasesReoviridae InfectionsSensitivity and SpecificitySerogroupSerologic TestsRecombinasesEpizootic haemorrhagic disease virusNucleic acidRecombinase polymerase amplificationThe Palyam serogroup viruses

Identifiers

PMID34433470
PMCPMC8390197
OpenAlexW3194500043

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.