Evidence map›Paper›PMID 34432491›Full record

ArticleApplied and environmental microbiology2021

Deciphering Microbial Metal Toxicity Responses via Random Bar Code Transposon Site Sequencing and Activity-Based Metabolomics.

Michael P Thorgersen, Jingchuan Xue, Erica L W Majumder, Valentine V Trotter, Xiaoxuan Ge, Farris L Poole, Trenton K Owens, Lauren M Lui, Torben N Nielsen, Adam P Arkin and 3 more

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Applied and environmental microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Soft-metal(loid)s induce protein aggregation inFrontiers in microbiology · 2023
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Michael P Thorgersen *Department of Biochemistry & Molecular Biology, University of Georgiagrid.213876.9, Athens, Georgia, USA.
Jingchuan Xue *The Scripps Center for Mass Spectrometry and Department of Molecular Biology, The Scripps Research Institutegrid.214007.0, La Jolla, California, USA.
Erica L W MajumderThe Scripps Center for Mass Spectrometry and Department of Molecular Biology, The Scripps Research Institutegrid.214007.0, La Jolla, California, USA.ORCID 0000-0003-3444-3881
Valentine V TrotterEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Xiaoxuan GeDepartment of Biochemistry & Molecular Biology, University of Georgiagrid.213876.9, Athens, Georgia, USA.
Farris L PooleDepartment of Biochemistry & Molecular Biology, University of Georgiagrid.213876.9, Athens, Georgia, USA.
Trenton K OwensEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Lauren M LuiEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Torben N NielsenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Adam P ArkinEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Adam M DeutschbauerEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, USA.
Gary SiuzdakThe Scripps Center for Mass Spectrometry and Department of Molecular Biology, The Scripps Research Institutegrid.214007.0, La Jolla, California, USA.
Michael W W AdamsDepartment of Biochemistry & Molecular Biology, University of Georgiagrid.213876.9, Athens, Georgia, USA.ORCID 0000-0002-9796-5014
Lawrence Berkeley National Laboratory · USUniversity of Georgia · USScripps Research Institute · US

Funding

U.S. Department of Energy (DOE) DE-AC02-05CH11231
6 · The paper itself

Abstract

To uncover metal toxicity targets and defense mechanisms of the facultative anaerobe

Indexed as

DNA Transposable ElementsMetabolomicsEnvironmental PollutantsMetalsPantoeaDNA Transposable ElementsEnvironmental PollutantsMetalsmetabolomicsmetal resistancetransposon mutagenesis

Identifiers

PMID34432491
PMCPMC8516053
OpenAlexW3193973428

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.